| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.007G334800.2 |
| Family | GT48 |
| Protein Properties | Length: 1811 Molecular Weight: 209576 Isoelectric Point: 7.9369 |
| Chromosome | Chromosome/Scaffold: 07 Start: 55888992 End: 55906278 |
| Description | glucan synthase-like 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT48 | 1088 | 1674 | 0 |
| IPANLEARRRISFFATSLFMDMPSAPEVCSMMSFSVMTPHYMEDVNFSMKELQSSKGQVSIIFYMQKIFPDEWKNFLERMGYQNFNELIDDGKEEEIRKK INELIDDGKEEEIRKWASFRGQTLSRTVRGIMYYRQALKLQALLEMPEYKDVLEDVNVFERNNPKSSAELDALVDMKFTYVVSCQMFGSHKSSGDPRAED VKDLMIRYPALRVAYIEEKEEIIGDKPQKVYFSILAKAVGTFDQVIYRIKLPGPPIIGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKVRNLLQE FHHNRGRRPPTILGLREYIFTESVSTLAWFMSYQETSFVTIGQRLLANPLRVRFHYGHPDVFDRLFHITRGGISKASKTINLSEDVFAGFNSTLRRGCIT YHEYLQVGKGRDVGLNQISKFEAKVANGNSEQTLSRDIHRLGRRFDFFRMLSCYFTTIGFYFSSLISVLGIYVFLYGQLYLVLSGLEKALLIEARMKNIE SLETALASQSFIQLGLLTGLPMVMEIGLEKGFLTALKDFVLMQLQFAAVFFTFSLGTKTHHFGRTIMYGGAKYIPTGLVYDLFRRSY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1811 Download |
| MSNEIVPVDD PIEEPKPNKK PVVYDEDEGS EGVIKSLPYY GESSSSGSGG YVPEVFNSES 60 LPPTLTSEIQ RFLRVANMLE WKAPRVAYLC RFHAFEIAHN LDRNSTGRKV RQFKTVLLQR 120 LERDEETSKT TRLEQSDSRE LKRVYDENRR YINQHAEAFD LENSHGEKLL DACRIASVLY 180 EVLKTVIAGP QALADRESIQ ARSELFAYNI LPLDHGGIQQ AIMKFPEIKV AIQVIRNVRG 240 LPSTQNLPKR GTFVDCFEFL QYSFGFQKEN VANQREHLVL LLANVLSRHS RKQALALKTI 300 DASIDELMRK FFKNYTNWCK FLVRKSNIRL PCVKQDAQQY KILYIGLYLL IWGEAANLRF 360 MPECLCYIFH HMAYELHGML TGAVSMTTGD TIEPAYGGSR ESFLSNVVTP IYEVIREEAE 420 KNKCGTADHT TWRNYDDLNE FFWSPDCFQV GWPMRTKHDF FCTSSPKKSK VKNSRSAREQ 480 RKEKETEDEE QGLNDVTSEE NSEPKWLGKT NFVEIRSFWQ VFRSFDRMWS FFILSLQAMI 540 IMACHDVGSP LEVFDAVILE DVMSIFITSA ILKLIQAILD ITFTWKARNT MELSQKRIQL 600 LRLAYAVIWT IVLPVVYAQS RRKYTCYSTQ YESWIGKWCY SPFMVVVVIY LITNAVDLVL 660 FFVPAVSKYI EISNWSICRT ISRWTQPRLY VGRGMQETQI SLFKYTFFWM LVLSTKLVFS 720 YSFEIKPLIA PTREIMKIGV QTYDWHELFP KVRSNVGAIV AVWAPIIVVY FMDTQIWYSV 780 YCTVCGGLYG ILHHLGEIRT LGMLRSRFHS LPSAFNRLIP PPSKKRTKSF LQNIFCKVSK 840 SEVLDLKFVL VWNQIISNFR SEDLISNREM DLMTIPTSGL FPEFIRWPIF LLANKFSTAL 900 SIARDFVGKD EKLFKRIRKD EYMYFCVKEC YESVKYILEV LIVGDLEKRV VSNIVNEIER 960 SIAESTFLQD FKMSALPALQ NKFVELLELI AEGDKNQNGK VVQVLQDIFE LVTNDMMANG 1020 HRVVDLIECS QEAVDDFTVF SRKIEPQLFE SAASKTSICF PLPDDGPLTE QIKRLHLLLT 1080 VKDKAMDIPA NLEARRRISF FATSLFMDMP SAPEVCSMMS FSVMTPHYME DVNFSMKELQ 1140 SSKGQVSIIF YMQKIFPDEW KNFLERMGYQ NFNELIDDGK EEEIRKKINE LIDDGKEEEI 1200 RKWASFRGQT LSRTVRGIMY YRQALKLQAL LEMPEYKDVL EDVNVFERNN PKSSAELDAL 1260 VDMKFTYVVS CQMFGSHKSS GDPRAEDVKD LMIRYPALRV AYIEEKEEII GDKPQKVYFS 1320 ILAKAVGTFD QVIYRIKLPG PPIIGEGKPE NQNHAIIFTR GEALQTIDMN QDNYLEEALK 1380 VRNLLQEFHH NRGRRPPTIL GLREYIFTES VSTLAWFMSY QETSFVTIGQ RLLANPLRVR 1440 FHYGHPDVFD RLFHITRGGI SKASKTINLS EDVFAGFNST LRRGCITYHE YLQVGKGRDV 1500 GLNQISKFEA KVANGNSEQT LSRDIHRLGR RFDFFRMLSC YFTTIGFYFS SLISVLGIYV 1560 FLYGQLYLVL SGLEKALLIE ARMKNIESLE TALASQSFIQ LGLLTGLPMV MEIGLEKGFL 1620 TALKDFVLMQ LQFAAVFFTF SLGTKTHHFG RTIMYGGAKY IPTGLVYDLF RRSYQSSMAY 1680 VLITYSVWFM TMTWLFAPFL FNPSGFEWDE IVDDWKGWNK WIKEKGGIGI QQNKSWQSWW 1740 NDEQAHLRRS GYGARLFEIL LSIRFFLYQY GLVYHLDISQ QSKNFLVYVL SWVVILAVFL 1800 TVKVKFIQVS * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam04652 | DUF605 | 0.0001 | 69 | 124 | 56 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. |
| pfam14288 | FKS1_dom1 | 2.0e-48 | 352 | 455 | 105 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. |
| pfam02364 | Glucan_synthase | 0 | 1088 | 1799 | 811 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB02389.1 | 0 | 1 | 1782 | 1 | 1813 | glucan synthase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_188075.1 | 0 | 1 | 1782 | 1 | 1814 | ATGSL04 (glucan synthase-like 4); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Swiss-Prot | Q9LUD7 | 0 | 1 | 1782 | 1 | 1817 | CALS8_ARATH RecName: Full=Putative callose synthase 8; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 4 |
| RefSeq | XP_002267956.1 | 0 | 53 | 1783 | 31 | 1768 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002317363.1 | 0 | 3 | 1784 | 2 | 1804 | predicted protein [Populus trichocarpa] |
