y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G349200.1 |
Family | GH14 |
Protein Properties | Length: 493 Molecular Weight: 55548.1 Isoelectric Point: 4.8905 |
Chromosome | Chromosome/Scaffold: 07 Start: 57929522 End: 57934365 |
Description | beta-amylase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 15 | 431 | 0 |
YVMLPLGIISTENVLLDKEGLKQQLLKLKTAGIDGVMSDVWWGIVESKGPKQYDWSAYRSLVELIKECGMKMQAIMSFHQCGGNVGDEVTIPIPQWVLDI GEENPDIFYTDREGNRNKEYLTLGVDHLPLFHGRTAVQVYGDYMKSFKETMADLIGEVIIDIEVGLGAAGELRYPSYPQSLGWVFPGIGEFQCYDKYLKA AFKEAATKAGHPEWELPDNAGTYNDTPDSTEFFASNGTYLTDKGKFFLTWYSNNLITHGDDILDEANKAFLGCKVKLAAKVSGMHWWYNSPSHAAELTAG YYNLYDRDGYRPIARMLSRHDAILNFTCLEMRDSEQDAAAKSAPQELVQQVLSGAWREHIEVAGENALSRYDSYAYNQILLNARPNGITNKGVPKMHGFT YLRSSDDLFEDTNFELF |
Full Sequence |
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Protein Sequence Length: 493 Download |
MAEGKKMLAN YVPVYVMLPL GIISTENVLL DKEGLKQQLL KLKTAGIDGV MSDVWWGIVE 60 SKGPKQYDWS AYRSLVELIK ECGMKMQAIM SFHQCGGNVG DEVTIPIPQW VLDIGEENPD 120 IFYTDREGNR NKEYLTLGVD HLPLFHGRTA VQVYGDYMKS FKETMADLIG EVIIDIEVGL 180 GAAGELRYPS YPQSLGWVFP GIGEFQCYDK YLKAAFKEAA TKAGHPEWEL PDNAGTYNDT 240 PDSTEFFASN GTYLTDKGKF FLTWYSNNLI THGDDILDEA NKAFLGCKVK LAAKVSGMHW 300 WYNSPSHAAE LTAGYYNLYD RDGYRPIARM LSRHDAILNF TCLEMRDSEQ DAAAKSAPQE 360 LVQQVLSGAW REHIEVAGEN ALSRYDSYAY NQILLNARPN GITNKGVPKM HGFTYLRSSD 420 DLFEDTNFEL FKIFVKKMHA DQEYCSDPAK YGKELKPLKR SKPKIPIEDL LDATTPMKPL 480 PWDEETDMKV DG* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02705 | PLN02705 | 4.0e-134 | 11 | 441 | 438 | + beta-amylase | ||
PLN02905 | PLN02905 | 6.0e-153 | 11 | 441 | 436 | + beta-amylase | ||
PLN00197 | PLN00197 | 1.0e-163 | 3 | 438 | 440 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 1.0e-179 | 12 | 438 | 433 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 2 | 492 | 494 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1UKO | 0 | 7 | 492 | 7 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1UKP | 0 | 7 | 492 | 7 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Swiss-Prot | O22585 | 0 | 5 | 492 | 6 | 496 | AMYB_MEDSA RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase |
Swiss-Prot | O64407 | 0 | 5 | 492 | 6 | 496 | AMYB_VIGUN RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase |
RefSeq | XP_002327920.1 | 0 | 5 | 492 | 9 | 499 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uko_D | 0 | 7 | 492 | 7 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 7 | 492 | 7 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_B | 0 | 7 | 492 | 7 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_A | 0 | 7 | 492 | 7 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_D | 0 | 7 | 492 | 7 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777976 | 450 | 47 | 493 | 0 |
HO803971 | 396 | 90 | 482 | 0 |
HO782669 | 385 | 107 | 488 | 0 |
CO111017 | 246 | 73 | 318 | 0 |
GT625519 | 284 | 89 | 371 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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