y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G349700.2 |
Family | GH1 |
Protein Properties | Length: 433 Molecular Weight: 49061.9 Isoelectric Point: 5.0689 |
Chromosome | Chromosome/Scaffold: 07 Start: 57968021 End: 57972932 |
Description | beta glucosidase 42 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 25 | 431 | 0 |
RADFPPHFVFGVSTSSYQIEGGVNEGGRGKSIWDAFSHIEGKIVDGSNADVAVDHYHRYKEDIELISELGFKAYRFSISWPRIFPDGLGTKVNEEGIAFY NNVIDALLEKGIEPFVTLYHWDLPLHLHESIGGWLNKQIVDYFAKFADTCFEHFGDRVKNWGTINEPLHIAVGGYDTGRSAPGRNHNSSIETYLAAHHMI LAHAAAVSIYHSKYKDKQGGQIGLVVDCEWAEANSDKIEDQCAAERRVEFQLGWFLHPLYLGDYPESMRDRLGEQLPQFTEEDEELLKSSTDFIGLNQYT SRLVSHAEDSVEEGHFEKAQQVAKIVEWEDGGIIGEKAASEWLYIVPWGMRKVLNYISHTYNNPPIYIMENGMDDEINENVPLHEMLDDKKRIEFYKGYV ASVAQAI |
Full Sequence |
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Protein Sequence Length: 433 Download |
MAKKKHVLKE GDEHDGSNTK KQVCRADFPP HFVFGVSTSS YQIEGGVNEG GRGKSIWDAF 60 SHIEGKIVDG SNADVAVDHY HRYKEDIELI SELGFKAYRF SISWPRIFPD GLGTKVNEEG 120 IAFYNNVIDA LLEKGIEPFV TLYHWDLPLH LHESIGGWLN KQIVDYFAKF ADTCFEHFGD 180 RVKNWGTINE PLHIAVGGYD TGRSAPGRNH NSSIETYLAA HHMILAHAAA VSIYHSKYKD 240 KQGGQIGLVV DCEWAEANSD KIEDQCAAER RVEFQLGWFL HPLYLGDYPE SMRDRLGEQL 300 PQFTEEDEEL LKSSTDFIGL NQYTSRLVSH AEDSVEEGHF EKAQQVAKIV EWEDGGIIGE 360 KAASEWLYIV PWGMRKVLNY ISHTYNNPPI YIMENGMDDE INENVPLHEM LDDKKRIEFY 420 KGYVASVAQA IK* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 3.0e-103 | 25 | 432 | 418 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 6.0e-112 | 25 | 432 | 428 | + beta-glucosidase | ||
COG2723 | BglB | 9.0e-118 | 28 | 431 | 418 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 2.0e-140 | 29 | 432 | 407 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-150 | 28 | 431 | 410 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP51059.1 | 0 | 20 | 432 | 15 | 426 | latex cyanogenic beta glucosidase [Hevea brasiliensis] |
GenBank | ABW76289.1 | 0 | 1 | 432 | 1 | 429 | beta-glucosidase G4 [Medicago truncatula] |
RefSeq | NP_001031975.1 | 0 | 25 | 432 | 18 | 426 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270406.1 | 0 | 22 | 432 | 554 | 963 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514775.1 | 0 | 20 | 432 | 17 | 436 | beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 23 | 432 | 12 | 432 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3gnp_A | 0 | 23 | 432 | 12 | 432 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3gno_A | 0 | 23 | 432 | 12 | 432 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 23 | 431 | 15 | 426 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 23 | 431 | 15 | 426 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO086766 | 269 | 49 | 317 | 0 |
CO098567 | 245 | 188 | 432 | 0 |
DW499943 | 246 | 187 | 432 | 0 |
DW226335 | 232 | 117 | 348 | 0 |
CO098567 | 33 | 165 | 197 | 0.0001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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