y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G000600.1 |
Family | GH35 |
Protein Properties | Length: 846 Molecular Weight: 94388.6 Isoelectric Point: 7.2621 |
Chromosome | Chromosome/Scaffold: 08 Start: 128515 End: 150657 |
Description | beta-galactosidase 10 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 32 | 335 | 0 |
LIIDGQRKLLISAAIHYPRSVPAMWPGLVQTAKEGGVDVIESYVFWNGHELSPGKYNFEGRYDLVKFVKIVQQAGMYMILRIGPFVAAEWNFGGVPAWLH YVPGTVFRTDNEPFKYYMRNFTTFIVNLMKQEKLFAPQGGPIILAQVENEYGYYEKFYGEGAKRYVTWAARMAVSQNIGVPWIMCQQDDAPDPVINTCNS FYCDQFTPNSPNKPKIWTENWPGWFKTFGARDPHRPAEDVAFSVARFFQKGGSVHNYYMYHGGTNFGRTSGGPFITTSYDYEAPIDEYGLPRLPKWGHLK ELHK |
Full Sequence |
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Protein Sequence Length: 846 Download |
MKIFFLFLLF CFFTSLFNSC FAGNVTYDRR SLIIDGQRKL LISAAIHYPR SVPAMWPGLV 60 QTAKEGGVDV IESYVFWNGH ELSPGKYNFE GRYDLVKFVK IVQQAGMYMI LRIGPFVAAE 120 WNFGGVPAWL HYVPGTVFRT DNEPFKYYMR NFTTFIVNLM KQEKLFAPQG GPIILAQVEN 180 EYGYYEKFYG EGAKRYVTWA ARMAVSQNIG VPWIMCQQDD APDPVINTCN SFYCDQFTPN 240 SPNKPKIWTE NWPGWFKTFG ARDPHRPAED VAFSVARFFQ KGGSVHNYYM YHGGTNFGRT 300 SGGPFITTSY DYEAPIDEYG LPRLPKWGHL KELHKAIKLS EHALLKSEPT TLSLGPSQEA 360 DVYDDGSEVC AAFLANLDDK TDKNVVFRNV SYHLPSWSVS ILPDCKNVVF NTAKIGSQAS 420 LVEMMPEELT PSVTSPSKRL KALKWDVFVE NAGIWGVADF AKNDFVDHIN TTKDTTDYLW 480 YTTSIIVGEN EEFLKKASHP LLLIESKGHA LHAFVNQERQ GSASGNGSHS PFKFESPISL 540 KAGKNEIALL SMTVGLQNAG GLYEWVGAGL TSVKIEGLNN GTMDLSMSRW TYKIGLQGEH 600 LSIYKPDGLN SINWVSTSEP PKNQPLTWYK VVVDSPSGNE PVGLDMIHMG KGLAWLNGEE 660 IGRYWPIKSS EHEKCVEECD YRGKFFPDKC LTGCGEPTQR WYHVPRSWFK PSGNILVIFE 720 EKGGDPTKIT FSKRKISGLC SLIAEDFPMV DQAPVRKGGS GKSAAHLKCP KNTLISNVKF 780 ASFGNPTGKC GSYSMGKCHD PNSTLAVEKV CLGKNECAIE LTEENFDKGL CPGTTKRLAI 840 EAVCS* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02140 | Gal_Lectin | 1.0e-18 | 767 | 844 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-18 | 25 | 327 | 362 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-153 | 31 | 337 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 24 | 845 | 827 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF70823.1 | 0 | 24 | 845 | 45 | 870 | AF154422_1 beta-galactosidase [Solanum lycopersicum] |
DDBJ | BAD91080.1 | 0 | 24 | 845 | 28 | 851 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CBI21600.1 | 0 | 19 | 845 | 17 | 847 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002310540.1 | 0 | 9 | 845 | 5 | 827 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522927.1 | 0 | 20 | 845 | 24 | 803 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 3.00018e-42 | 19 | 320 | 2 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-34 | 25 | 320 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-34 | 25 | 320 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 3e-34 | 25 | 320 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |