Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G036000.1 |
Family | GH35 |
Protein Properties | Length: 845 Molecular Weight: 95309.2 Isoelectric Point: 8.4363 |
Chromosome | Chromosome/Scaffold: 08 Start: 4448353 End: 4453031 |
Description | glycosyl hydrolase family 35 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 53 | 357 | 0 |
LLVNGKRMLFFSGSIHYPRSPPDAWPDLIRKAKMGGLNMVETYVFWNVHEPVQGKYNFEGEYDLVKFIKLIQQNKMFAMLRVGPFVQGEWNHGGLPYWLR EVPNIIFRCDNEPFKMHMKKFVTLVIEKMKQAKLFAPQGGPIIVSQIENEYNTIQLAFRERGDSYVQWAAKMALSLDTKVPWIMCKQKDAPDPIINTCNG RHCGDTFTGPNGPNKPFLWTENWTAQFRVFGDPPSQRSAEDLAFSIIRFCSKNGTLVNYYMYHGGTNFGRTSSSFTTTRYYDEAPLDEFGLIREPKWGHL KDAHR |
Full Sequence |
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Protein Sequence Length: 845 Download |
MVQVEPGRIL LITFLSTLLI TSSIAQKEDE EEVDPDSPES TTPKEVTYDS RSLLVNGKRM 60 LFFSGSIHYP RSPPDAWPDL IRKAKMGGLN MVETYVFWNV HEPVQGKYNF EGEYDLVKFI 120 KLIQQNKMFA MLRVGPFVQG EWNHGGLPYW LREVPNIIFR CDNEPFKMHM KKFVTLVIEK 180 MKQAKLFAPQ GGPIIVSQIE NEYNTIQLAF RERGDSYVQW AAKMALSLDT KVPWIMCKQK 240 DAPDPIINTC NGRHCGDTFT GPNGPNKPFL WTENWTAQFR VFGDPPSQRS AEDLAFSIIR 300 FCSKNGTLVN YYMYHGGTNF GRTSSSFTTT RYYDEAPLDE FGLIREPKWG HLKDAHRAVN 360 LCKRALFSGS PFVQKLGPDQ EARVWEQPGT SLCSAFLTNN NTKKPQALRF RGQDYQLPPR 420 SISILPDCKT EVFNSQMITT HHNSRNIVRS IAANKNFNWE MYREVVPDDP GNKLNEPREL 480 YELTKDTSDY AWYITKLDLG RRDLPMKNEI LPVLRVASLG HGLHCYVNGK YIGSAHGSKV 540 EKSFVFQKPV EFQAGSNQIA LLGFLVGLPD SGAYMEKRYA GPRSITILGL NTGTLDITLN 600 TWSHQVGLDG EKNQIYTQNG FPKVQWVKGG PSEGVTWYKG YFDAPEGDNP VAVKMTGMGK 660 GMVYINGRNI GRYWMSYLSP LKRPTQSEYH IPRSYLQPTM NLIVIVEDEK GDPKNIEIVL 720 VDRDTICGFI TENHLPSVRL FEGKGGKLVA LEKDLKPRVE LACPGQKQIV AVEFASFGDP 780 FGACGHYVEG NCTSPVAKQV VEKFCLGKPS CKIPLDTPDL HNKNEACPEM KKTLAIQAKC 840 AFKA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-6 | 73 | 212 | 167 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 4.0e-13 | 761 | 840 | 83 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 9.0e-17 | 46 | 203 | 168 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-132 | 52 | 359 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 46 | 841 | 826 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS76480.1 | 0 | 4 | 841 | 2 | 843 | beta-galactosidase [Gossypium hirsutum] |
GenBank | ACC60982.1 | 0 | 46 | 843 | 28 | 829 | beta-galactosidase 2 precursor [Petunia x hybrida] |
RefSeq | XP_002278545.1 | 0 | 44 | 844 | 30 | 833 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306183.1 | 0 | 44 | 844 | 29 | 830 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002312963.1 | 0 | 46 | 843 | 31 | 828 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3thd_D | 2e-39 | 45 | 346 | 10 | 322 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 3thd_D | 0.0003 | 636 | 734 | 527 | 629 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 3thd_C | 2e-39 | 45 | 346 | 10 | 322 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 3thd_C | 0.0003 | 636 | 734 | 527 | 629 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 3thd_B | 2e-39 | 45 | 346 | 10 | 322 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |