Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G038600.5 |
Family | AA1 |
Protein Properties | Length: 365 Molecular Weight: 40708.9 Isoelectric Point: 9.349 |
Chromosome | Chromosome/Scaffold: 08 Start: 4870354 End: 4872649 |
Description | SKU5 similar 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 8 | 319 | 0 |
LPFPDGILINGHGLNGASFTVEQGKTYRFRISNVGLQNSLNFRIQGHKMKLVEVEGTHTVQTIYESLDVHVGQSYSVLVTMDQAAQDFYIVASTRFTDNI LSTTATLHYSNSNKAVSGPIPAGPTDQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINITRTIKVVSSAAQVKGKQRYAVNSVSFVPTDTPLKLADY FKIGGVFRVGSIPDNPTGQNMYLDTSVMGADYRAFVEIVFENHENIVQTWHIDGYAFWVVGMNGGVWTPNSREEYNLRDAVSRSTTQVYPKSWTAIYMAL DNVGMWNVRSEF |
Full Sequence |
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Protein Sequence Length: 365 Download |
MLDGGHKLPF PDGILINGHG LNGASFTVEQ GKTYRFRISN VGLQNSLNFR IQGHKMKLVE 60 VEGTHTVQTI YESLDVHVGQ SYSVLVTMDQ AAQDFYIVAS TRFTDNILST TATLHYSNSN 120 KAVSGPIPAG PTDQIDWSLN QARSIRTNLT ASGPRPNPQG SYHYGLINIT RTIKVVSSAA 180 QVKGKQRYAV NSVSFVPTDT PLKLADYFKI GGVFRVGSIP DNPTGQNMYL DTSVMGADYR 240 AFVEIVFENH ENIVQTWHID GYAFWVVGMN GGVWTPNSRE EYNLRDAVSR STTQVYPKSW 300 TAIYMALDNV GMWNVRSEFW ARQYLGQQFY LRVYTPVNSL RDEYLIPKNA LLCGRAQGRS 360 TRPL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 6.0e-130 | 1 | 355 | 366 | + copper ion binding / pectinesterase | ||
PLN02354 | PLN02354 | 2.0e-171 | 2 | 358 | 365 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 5.0e-180 | 2 | 361 | 360 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 2 | 364 | 364 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 1 | 361 | 364 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN83942.1 | 0 | 1 | 364 | 178 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282214.1 | 0 | 1 | 364 | 179 | 542 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285913.1 | 0 | 1 | 364 | 178 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306213.1 | 0 | 1 | 364 | 181 | 543 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528421.1 | 0 | 1 | 364 | 181 | 544 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 4e-28 | 26 | 354 | 206 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asq_A | 4e-28 | 26 | 354 | 206 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asp_B | 4e-28 | 26 | 354 | 206 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asp_A | 4e-28 | 26 | 354 | 206 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1aso_B | 4e-28 | 26 | 354 | 206 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO127252 | 271 | 45 | 315 | 0 |
DT545587 | 258 | 1 | 258 | 0 |
CB893477 | 291 | 75 | 365 | 0 |
FP029502 | 286 | 79 | 364 | 0 |
DT338359 | 325 | 29 | 353 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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