| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.008G046700.1 |
| Family | GH116 |
| Protein Properties | Length: 954 Molecular Weight: 106851 Isoelectric Point: 6.1527 |
| Chromosome | Chromosome/Scaffold: 08 Start: 6316255 End: 6325452 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 531 | 892 | 0 |
| GQFLYLEGIEYHMWNTYDVHFYASFALIMLFPKLQLSIQRDFAAAVMMHDPSKMKLLHDGQLVARKVLGAVPHDIGMDDPWFEVNAYCLYDTDRWKDLNP KFVLQVYRDVIATGDKKFAQTVWPSVYVAMAYMDQFDKDGDGMIENDGFPDQTYDTWSVSGVSAYSGGLWVAALQAASALAHEVGDKGSEDYFWYKFLKA KDVYQKLWNGSYFNYDNSGSRTSSSIQADQLAGQWYARACGLFPVVDEDKARSVLEKVYNYNVLKVKGGKRGAVNGMLPDGRVDMSSMQAREIWSGVTYA VAATMIHEDLVDMAFHTASGIFESVWSEEGLGYSFQTPEAWNTDDQYRSLTYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 954 Download |
| MSERKILENG FDEGDKDTSN HSINKVDTGK PPSLTWRRKL NGEGRVPSMF TLTFQEKLQM 60 APIGIRLWQL IRESSAKGRR GIIIDPFAKR HITSSHGIPL GGVGAGSIGR SYKGEFQRWQ 120 LFPRICEEKP VLANQFSVFV SRSSGEKYSS VLCPASSELL KEDAVSGIGS WDWNLRGNNS 180 TYHALYPRAW TVYEGEPDPE LKIVCRQISP VIPDNYKESS FPVSAFTFTL YNTGNINADV 240 TLLFTWANSV GGVSEFSGRH SNSKLIMKDG VHGVLLHHMT ADEQPPVTFA IAAQETDGIR 300 ISECPCFLIS GNSQGITAKE MWQEIKEHGS FEHLKSTEAS VPSEQGSSIG AAIAASVTIP 360 SDAVRTVNFS LAWDCPEVNF MGGKTYYRRY TKFYGSNGDA AANIAHDAIL EHNSWESQIE 420 TWQRPVLEDK RLPEWYPFTL FNELYYLNSG GTIWTDGSSP VHSLVSIGGK KFSLDKSQLG 480 LKSIIGVPHK NDTAIDILGR MTSILEQIHT PITSNSALGT NLLQEGEENI GQFLYLEGIE 540 YHMWNTYDVH FYASFALIML FPKLQLSIQR DFAAAVMMHD PSKMKLLHDG QLVARKVLGA 600 VPHDIGMDDP WFEVNAYCLY DTDRWKDLNP KFVLQVYRDV IATGDKKFAQ TVWPSVYVAM 660 AYMDQFDKDG DGMIENDGFP DQTYDTWSVS GVSAYSGGLW VAALQAASAL AHEVGDKGSE 720 DYFWYKFLKA KDVYQKLWNG SYFNYDNSGS RTSSSIQADQ LAGQWYARAC GLFPVVDEDK 780 ARSVLEKVYN YNVLKVKGGK RGAVNGMLPD GRVDMSSMQA REIWSGVTYA VAATMIHEDL 840 VDMAFHTASG IFESVWSEEG LGYSFQTPEA WNTDDQYRSL TYMRPLAIWA MQWALSRPKV 900 PKQELKPEME ADSLRIHHAG FSKVARLLKL PEDQRSKSLL QIMFDYTCKR MLT* 960 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 4.0e-30 | 96 | 456 | 377 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 1.0e-62 | 97 | 415 | 327 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-67 | 530 | 895 | 384 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 6.0e-166 | 531 | 893 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_199801.2 | 0 | 1 | 953 | 1 | 957 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002264575.1 | 0 | 6 | 951 | 1 | 947 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328722.1 | 0 | 25 | 951 | 1 | 922 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331126.1 | 0 | 1 | 951 | 1 | 945 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528846.1 | 0 | 1 | 951 | 1 | 949 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG703027 | 328 | 549 | 876 | 0 |
| DY292040 | 374 | 544 | 913 | 0 |
| DY669443 | 289 | 357 | 645 | 0 |
| GT176060 | 350 | 439 | 788 | 0 |
| JG704091 | 299 | 578 | 876 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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