y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G073000.1 |
Family | AA1 |
Protein Properties | Length: 538 Molecular Weight: 60354.5 Isoelectric Point: 9.9156 |
Chromosome | Chromosome/Scaffold: 08 Start: 12722061 End: 12724855 |
Description | SKU5 similar 16 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 34 | 498 | 0 |
VVTYGTRAPLGVYQRVILINNQFPGPPIEAVTNDNIIVNVINQLDEPFLITWHGIKQRKASWQDGVLGTNCPIPPHSNWTYKFQLKDQIGTYMYYPSTSM HRAIGGFGAVNVNQRSVISIPYPAFAGDFTLLIGDWYKAGDKALRKRLNSGLVLPLPDGLLINGLHKSSVFTGQKGKTYRFRITNVGISTSINFRIQGHS LILVEVEGSHSLQEVYESIDIHPGQSITALVTLRGAIKDYYIVASTRFTKPILTTTGILRYQGSHTPPSLPLPIAPTYHVHWSMKQARTIRLNLTANAAR PNPQGTFHYGQINIVRRLVLANAEVKINGKLRYTVNGISYVDPTTPLKLADWFNIPGVFSLNNIKDLPTSRPPALGVSVFGLTLHDFVEIVFQNTEPTIQ SWHLDGSSFYVVGYGGGKWTTALKKRYNLVDAISRHTVQVYPNSWTAVLVSLDNKGMWNLRSQIW |
Full Sequence |
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Protein Sequence Length: 538 Download |
MKQVIFLQVL LGILCCFSIF CANAEDPYRY YTWVVTYGTR APLGVYQRVI LINNQFPGPP 60 IEAVTNDNII VNVINQLDEP FLITWHGIKQ RKASWQDGVL GTNCPIPPHS NWTYKFQLKD 120 QIGTYMYYPS TSMHRAIGGF GAVNVNQRSV ISIPYPAFAG DFTLLIGDWY KAGDKALRKR 180 LNSGLVLPLP DGLLINGLHK SSVFTGQKGK TYRFRITNVG ISTSINFRIQ GHSLILVEVE 240 GSHSLQEVYE SIDIHPGQSI TALVTLRGAI KDYYIVASTR FTKPILTTTG ILRYQGSHTP 300 PSLPLPIAPT YHVHWSMKQA RTIRLNLTAN AARPNPQGTF HYGQINIVRR LVLANAEVKI 360 NGKLRYTVNG ISYVDPTTPL KLADWFNIPG VFSLNNIKDL PTSRPPALGV SVFGLTLHDF 420 VEIVFQNTEP TIQSWHLDGS SFYVVGYGGG KWTTALKKRY NLVDAISRHT VQVYPNSWTA 480 VLVSLDNKGM WNLRSQIWSD RFLGKQTYLR VWNDEKSLYT ETDIPPNALR CGKAIHL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 0 | 1 | 535 | 536 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 9 | 537 | 541 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 1 | 534 | 534 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 27 | 533 | 524 | + copper ion binding / pectinesterase | ||
PLN02792 | PLN02792 | 0 | 19 | 534 | 520 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18561.1 | 0 | 1 | 534 | 65 | 598 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_565554.1 | 0 | 15 | 536 | 16 | 537 | sks16 (SKU5 Similar 16); copper ion binding / pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002268020.1 | 0 | 1 | 534 | 131 | 664 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310164.1 | 0 | 1 | 534 | 1 | 534 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522339.1 | 0 | 1 | 534 | 1 | 537 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 532 | 4 | 539 | A Chain A, Solution Structure Of The C-Terminal Ma-3 Domain Of Pdcd4 |
PDB | 1asq_A | 0 | 29 | 532 | 4 | 539 | A Chain A, Solution Structure Of The C-Terminal Ma-3 Domain Of Pdcd4 |
PDB | 1asp_B | 0 | 29 | 532 | 4 | 539 | A Chain A, Solution Structure Of The C-Terminal Ma-3 Domain Of Pdcd4 |
PDB | 1asp_A | 0 | 29 | 532 | 4 | 539 | A Chain A, Solution Structure Of The C-Terminal Ma-3 Domain Of Pdcd4 |
PDB | 1aso_B | 0 | 29 | 532 | 4 | 539 | A Chain A, Solution Structure Of The C-Terminal Ma-3 Domain Of Pdcd4 |