Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G075700.2 |
Family | GH35 |
Protein Properties | Length: 209 Molecular Weight: 23885.1 Isoelectric Point: 10.249 |
Chromosome | Chromosome/Scaffold: 08 Start: 13925743 End: 13928586 |
Description | beta-galactosidase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 88 | 176 | 5.4e-39 |
FWKDGKPFQIIFGDLHYFRVLLEYWEDRLLRAKALGLNTIQTSIPWNLHEPEAGKLVFEGIADLVSFLKLCQKLGLLAMLRAGPYICAD |
Full Sequence |
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Protein Sequence Length: 209 Download |
MNRSKSLAVT SKSITAMARK RSSKTMLISF LLLSLLAFLY FLPVFASLPS LPSYSHSHDL 60 HFHLPRHQRL HRRQKIGVRK FEIAEDKFWK DGKPFQIIFG DLHYFRVLLE YWEDRLLRAK 120 ALGLNTIQTS IPWNLHEPEA GKLVFEGIAD LVSFLKLCQK LGLLAMLRAG PYICADPRDS 180 ETVRPLDLHH SMEVHLSLSK GSVCPSFM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3250 | LacZ | 0.0003 | 74 | 194 | 127 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
COG1874 | LacA | 3.0e-18 | 86 | 171 | 87 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN03059 | PLN03059 | 1.0e-19 | 97 | 176 | 80 | + beta-galactosidase; Provisional | ||
pfam01301 | Glyco_hydro_35 | 6.0e-48 | 88 | 175 | 88 | + Glycosyl hydrolases family 35. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD28500.2 | 0 | 79 | 176 | 52 | 149 | Glycoside hydrolase, family 35 [Medicago truncatula] |
EMBL | CBI35958.1 | 0 | 3 | 176 | 8 | 170 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_565051.1 | 0 | 74 | 198 | 56 | 187 | BGAL17 (beta-galactosidase 17); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002280228.1 | 0 | 79 | 176 | 49 | 146 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002527397.1 | 0 | 79 | 178 | 53 | 152 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3thd_D | 6e-28 | 79 | 176 | 7 | 106 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 3thd_C | 6e-28 | 79 | 176 | 7 | 106 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 3thd_B | 6e-28 | 79 | 176 | 7 | 106 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 3thd_A | 6e-28 | 79 | 176 | 7 | 106 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 3thc_D | 6e-28 | 79 | 176 | 7 | 106 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |