Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G135800.1 |
Family | CBM43 |
Protein Properties | Length: 137 Molecular Weight: 14734.8 Isoelectric Point: 8.9964 |
Chromosome | Chromosome/Scaffold: 08 Start: 38408726 End: 38411169 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 50 | 133 | 4e-32 |
WCIAKPSTENLRLNGNINYSCSQKGVDCKPIQPGGTCYRPNTIVSHASYAMNLFYKAAGKNSWNCHFNGTGIIISENPSIGSCN |
Full Sequence |
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Protein Sequence Length: 137 Download |
MKCGRQLLAL AFLHLAFSLL LCFGACPDAR RHGNGRNSNQ KASSGGENTW CIAKPSTENL 60 RLNGNINYSC SQKGVDCKPI QPGGTCYRPN TIVSHASYAM NLFYKAAGKN SWNCHFNGTG 120 IIISENPSIG SCNYPM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-17 | 49 | 121 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-32 | 49 | 134 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2JON | 1e-31 | 49 | 135 | 12 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
GenBank | AAK58515.1 | 3e-30 | 49 | 135 | 371 | 456 | AF249675_1 beta-1,3-glucanase-like protein [Olea europaea] |
RefSeq | XP_002273170.1 | 9.80909e-45 | 10 | 134 | 8 | 130 | PREDICTED: similar to At2g43670 [Vitis vinifera] |
RefSeq | XP_002320265.1 | 1.99993e-41 | 28 | 136 | 26 | 134 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515203.1 | 9.80909e-45 | 10 | 127 | 8 | 129 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-33 | 49 | 135 | 12 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |