y
Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.008G137200.1 |
Family | CE8 |
Protein Properties | Length: 558 Molecular Weight: 62043.7 Isoelectric Point: 9.5184 |
Chromosome | Chromosome/Scaffold: 08 Start: 38681684 End: 38683441 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 245 | 537 | 0 |
AIVAMDGSGHFKTIAEALAAAPKQSNVRHVIYVKAGVYKEYITVDKKTINILMYGDGPRKTIVTGNKNYVDGTPTWKTSTFSAIGDGFICRSMGFQNTAG PSKHQAVALRIQSDRSAFFDCRMDGNQDTLYNHANRQFFRNCVISGTIDFIFGDSPTLIQNTLIIARRPMDNQLNTVTAQGKTDANENTGIVIQNCRIVP EQILFPDRFKIATYLGRPWKQYSTTVVMESTLADFIRPEGWTPWAGAAFEDTLYYAEYNNRGPGASLDRRVDWKGYHKIDKNTAMRFTAQSFL |
Full Sequence |
---|
Protein Sequence Length: 558 Download |
MSVKVVITAV SVILLVGVVA GFFAVIQHRK HSGGTELSLQ MKAVSNFCSA TSYKEACQKS 60 LNSVNSTDPE QFIGRSILVA EEAVKKFFNY SDSLIVKVKN NSRTKMALDD CKDMMSYAVQ 120 SLQASYSEVG NAQLHSISDR VSDLRTWLSA VISYQESCLD GFESDERMKE NMTIGITDAR 180 ELTSNALAIV SKLSEILSKF GLQLKAPKTS RRLLSTGKDK YPSWFSNVDR KLLAKIDNSN 240 IKPNAIVAMD GSGHFKTIAE ALAAAPKQSN VRHVIYVKAG VYKEYITVDK KTINILMYGD 300 GPRKTIVTGN KNYVDGTPTW KTSTFSAIGD GFICRSMGFQ NTAGPSKHQA VALRIQSDRS 360 AFFDCRMDGN QDTLYNHANR QFFRNCVISG TIDFIFGDSP TLIQNTLIIA RRPMDNQLNT 420 VTAQGKTDAN ENTGIVIQNC RIVPEQILFP DRFKIATYLG RPWKQYSTTV VMESTLADFI 480 RPEGWTPWAG AAFEDTLYYA EYNNRGPGAS LDRRVDWKGY HKIDKNTAMR FTAQSFLLSR 540 ENWLPQTGIP YIAGLRS* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02217 | PLN02217 | 7.0e-166 | 5 | 555 | 556 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 2.0e-171 | 4 | 551 | 570 | + pectinesterase | ||
pfam01095 | Pectinesterase | 2.0e-178 | 244 | 537 | 295 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 4 | 555 | 583 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 0 | 4 | 555 | 564 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26012.1 | 0 | 28 | 557 | 33 | 569 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274176.1 | 0 | 30 | 556 | 33 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002275000.1 | 0 | 28 | 557 | 33 | 569 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298186.1 | 0 | 37 | 556 | 41 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303172.1 | 0 | 28 | 556 | 29 | 559 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 237 | 555 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 241 | 555 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 8e-23 | 244 | 514 | 5 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 8e-23 | 244 | 514 | 5 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 9e-23 | 244 | 514 | 5 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |