y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G140600.1 |
Family | GH3 |
Protein Properties | Length: 775 Molecular Weight: 83191.9 Isoelectric Point: 8.1396 |
Chromosome | Chromosome/Scaffold: 08 Start: 39154734 End: 39159241 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 79 | 325 | 0 |
PIPRLGIKGYEWWSEALHGVSDVGPGTKFGGAFPGATSFPQVISTAASFNATLWEAIGRVVSDEARAMYNGGSAGLTYWSPNVNIFRDPRWGRGQETPGE DPVLAGTYAAYYVKGLQGNDGDRLKVAACCKHFTAYDLDNWNGVDRFHFNAQVSKQDIEDTFDVPFKMCVQDGNVASVMCSYNEVNGVPTCADPNLLRNT VRGQWKLDGYIVSDCDSVGVFYNTQHYTTTPEQAAADAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 775 Download |
MGIGSLTLPS PPQFIILSLL LLCAFGEAVD PFACDPKDAV TAGFPFCKVS MPMSDRVNDL 60 VGRLTLQEKV RLLINGAAPI PRLGIKGYEW WSEALHGVSD VGPGTKFGGA FPGATSFPQV 120 ISTAASFNAT LWEAIGRVVS DEARAMYNGG SAGLTYWSPN VNIFRDPRWG RGQETPGEDP 180 VLAGTYAAYY VKGLQGNDGD RLKVAACCKH FTAYDLDNWN GVDRFHFNAQ VSKQDIEDTF 240 DVPFKMCVQD GNVASVMCSY NEVNGVPTCA DPNLLRNTVR GQWKLDGYIV SDCDSVGVFY 300 NTQHYTTTPE QAAADAIKAG LDLDCGPFLA QHSEDAVKQG LLNEVDINNA LVNTLRVQMR 360 LGMFDGEPSV QPFGKLGPKD VCTPSNQELA LEAARQGIVL LKNSGVSLPL SHRRHQTVAV 420 IGPNSDATVS MIGNYAGVAC GYTSPLQGIG SYVKTIHQLG CANVACRDDK LFSAAIDAAR 480 QADATILVMG LDQSIEAEFR DRTGLLLPGR QQELVSKVAK ASKGPTVLVL MSGGPIDVSF 540 AKNDPRIGAI LWAGYPGQAG GAAIADVLYG TTNPGGKLPM TWYPQDYVSN LAMTDMAMRS 600 SRHRNYPGRT YRFYKGPVVY PFGHGLSYTN FVHTIVNAPH VVTVPLDGHR RSGNATVLGK 660 AIKVNHARCN KLSVGLQVNV KNTGSKDGTH TMLVFSTPPA GHWAPSKQLV AFAKVYVPAR 720 SEQQVGISIH VCKFLSVVDR SGVRRIPIGL HRIHIGDVKH SVSLEAATLG VIKS* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 7.0e-57 | 80 | 461 | 391 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-57 | 398 | 629 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 6.0e-64 | 60 | 357 | 305 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-73 | 115 | 729 | 669 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 12 | 766 | 778 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 14 | 774 | 9 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 14 | 774 | 14 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 3 | 774 | 1 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316021.1 | 0 | 27 | 774 | 23 | 768 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 28 | 774 | 24 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 115 | 729 | 91 | 696 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
PDB | 3u48_A | 0 | 115 | 729 | 91 | 696 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
PDB | 3u4a_B | 0 | 115 | 729 | 91 | 696 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
PDB | 3u4a_A | 0 | 115 | 729 | 91 | 696 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
PDB | 2x41_A | 1.00053e-42 | 55 | 765 | 2 | 708 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |