Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G141900.1 |
Family | GH9 |
Protein Properties | Length: 598 Molecular Weight: 66701.6 Isoelectric Point: 7.6705 |
Chromosome | Chromosome/Scaffold: 08 Start: 39340078 End: 39342009 |
Description | glycosyl hydrolase 9A1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 109 | 571 | 0 |
NYTIALQRALMFFNAQRSGKLPANNHVSWRGDSCLDDGNGYLNGLEGGYYDGGDAVKYSFPASFAMTMLSWSVLEYSAKYETAGELNHVKDIIRWGTDYL LKTFNSSADTIDKIVLQVGKNSSENCWIRPESINYPRPVIPCSTCPALAAEMAAALAAASIVFKDDHKYSKKLVHGADILFKFATKGEGERYAGGSDPPS NFYNSSGFWDEFVWGGAWMYCATGNSSYIDLVTSPGLAKHAEAFWGGPDHGVHGWDNKHAGAQLLMSRLRMFLDFGYPYEEMLKNFHEQISEIICSYLPG SHNFKRTNGGLIELNHGKPKPLQYVTNAAFLATLYADYLEATLTPGWQCGAKFYPKDAFRDFAKTQIDYILGRNLRHMSYVVGLSDHFPQYVHHKGASIP GYIKHQSCQEGLRWKESKKPNPNTIVGAMVGGPDKHDGFQDNRSNYNFTEPTIAGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 598 Download |
MSERSNLWGG TFDITLEMED QSIESGHRHY YDRSAYQSPL EDEVKQGWLL RPAMDMEMKR 60 KKKKRCFNIN PTVLIRTLVV VAVLAGFVAL VAFLATRRHH HRPPPVQDNY TIALQRALMF 120 FNAQRSGKLP ANNHVSWRGD SCLDDGNGYL NGLEGGYYDG GDAVKYSFPA SFAMTMLSWS 180 VLEYSAKYET AGELNHVKDI IRWGTDYLLK TFNSSADTID KIVLQVGKNS SENCWIRPES 240 INYPRPVIPC STCPALAAEM AAALAAASIV FKDDHKYSKK LVHGADILFK FATKGEGERY 300 AGGSDPPSNF YNSSGFWDEF VWGGAWMYCA TGNSSYIDLV TSPGLAKHAE AFWGGPDHGV 360 HGWDNKHAGA QLLMSRLRMF LDFGYPYEEM LKNFHEQISE IICSYLPGSH NFKRTNGGLI 420 ELNHGKPKPL QYVTNAAFLA TLYADYLEAT LTPGWQCGAK FYPKDAFRDF AKTQIDYILG 480 RNLRHMSYVV GLSDHFPQYV HHKGASIPGY IKHQSCQEGL RWKESKKPNP NTIVGAMVGG 540 PDKHDGFQDN RSNYNFTEPT IAGNAGLVAA LVALSDGSKT GIDKNTMFYA IPPFSMP* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02909 | PLN02909 | 2.0e-96 | 109 | 559 | 462 | + Endoglucanase | ||
PLN02266 | PLN02266 | 2.0e-96 | 99 | 559 | 473 | + endoglucanase | ||
PLN02613 | PLN02613 | 2.0e-96 | 107 | 560 | 467 | + endoglucanase | ||
PLN02345 | PLN02345 | 2.0e-114 | 113 | 560 | 459 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-137 | 109 | 561 | 462 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC49704.1 | 0 | 8 | 591 | 7 | 601 | endo-1,4-beta-glucanase [Solanum lycopersicum] |
GenBank | AAS45400.1 | 0 | 8 | 591 | 7 | 603 | endo-1,4-beta-glucanase [Populus tremuloides] |
GenBank | AAT75041.1 | 0 | 8 | 591 | 7 | 603 | Cel9A [Populus tremula x Populus tremuloides] |
RefSeq | XP_002332697.1 | 0 | 8 | 591 | 7 | 603 | hypothetical protein POPTRDRAFT_675657 [Populus trichocarpa] |
RefSeq | XP_002515321.1 | 0 | 6 | 594 | 5 | 585 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 109 | 574 | 4 | 428 | A Chain A, Glutathionylspermidine SynthetaseAMIDASE C59A COMPLEX WITH ADP AND Gsp |
PDB | 1ksc_A | 0 | 109 | 574 | 4 | 428 | A Chain A, Glutathionylspermidine SynthetaseAMIDASE C59A COMPLEX WITH ADP AND Gsp |
PDB | 1ks8_A | 0 | 109 | 574 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 109 | 574 | 25 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 109 | 574 | 5 | 440 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |