Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G143700.1 |
Family | CE8 |
Protein Properties | Length: 559 Molecular Weight: 62118.9 Isoelectric Point: 7.7102 |
Chromosome | Chromosome/Scaffold: 08 Start: 39543272 End: 39545387 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 247 | 542 | 0 |
LIVAQDGSGNFTTIGDAVAAAPIHSYERFVIYIKAGAYLENIEVEMEKTMVMFVGDGIGKTVVKANRNVADGHTTFRSATVAVMGDGFIAKGITFENSAG PSKNQAVALRSGSDLSAFYKCSFVAYQDTLYVHSLRQFYRECDIYGTVDCIFGNAAAVFQACSLYARKPNPDQENVFTAQGRADPNQNTGISILNCKIRA DSDLIPVISSFKTYLGRPWKEYSRTVIMRSYIDDLVDPAGWLEWNGNFALNTLYYGEFLNRGPGSDTSRRVTWPGYRVITSFADANQFTVGAFIQG |
Full Sequence |
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Protein Sequence Length: 559 Download |
MYDLSGRSNK IILVLLLVLV LISLIVPLEK SPETSETHHF HVNNNLQIAY TACEGTLYPD 60 LCVATVSILQ NLASRSLPDL ISAILIQTMD EVRLSCANCT EIEKGLKSNT TLEWAAINDC 120 IELFNHTLAE LRVALAELKP KRVRLSRNYH KIKTFLSAAM TNQYTCLDGF HGSKGKTKYV 180 IKEALHNISH HISNSLAMLN KVPGVNESKP VEVFPEYGRR RRYFPAWLSH KDRKLLQAPV 240 DAAEFDLIVA QDGSGNFTTI GDAVAAAPIH SYERFVIYIK AGAYLENIEV EMEKTMVMFV 300 GDGIGKTVVK ANRNVADGHT TFRSATVAVM GDGFIAKGIT FENSAGPSKN QAVALRSGSD 360 LSAFYKCSFV AYQDTLYVHS LRQFYRECDI YGTVDCIFGN AAAVFQACSL YARKPNPDQE 420 NVFTAQGRAD PNQNTGISIL NCKIRADSDL IPVISSFKTY LGRPWKEYSR TVIMRSYIDD 480 LVDPAGWLEW NGNFALNTLY YGEFLNRGPG SDTSRRVTWP GYRVITSFAD ANQFTVGAFI 540 QGNQWLNSTD IPFNLGLR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02933 | PLN02933 | 0 | 74 | 557 | 494 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 246 | 543 | 298 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 38 | 557 | 524 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 51 | 557 | 541 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 52 | 557 | 515 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACQ85264.1 | 0 | 38 | 557 | 44 | 564 | pectin methylesterase [Musa acuminata AAA Group] |
RefSeq | XP_002271665.1 | 0 | 1 | 553 | 1 | 559 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301486.1 | 0 | 112 | 557 | 6 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002455538.1 | 0 | 53 | 557 | 49 | 576 | hypothetical protein SORBIDRAFT_03g012830 [Sorghum bicolor] |
RefSeq | XP_002523113.1 | 0 | 34 | 557 | 34 | 556 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 246 | 557 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 248 | 557 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-20 | 242 | 465 | 1 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-20 | 242 | 465 | 1 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-20 | 242 | 465 | 1 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |