| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.008G156000.1 |
| Family | GT47 |
| Protein Properties | Length: 415 Molecular Weight: 47259.8 Isoelectric Point: 8.0143 |
| Chromosome | Chromosome/Scaffold: 08 Start: 41658527 End: 41661495 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 47 | 342 | 0 |
| RLKVYVYELPSKYNKKILQKDPRCLSHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPIYATCDLTPTGLPLPFKSPRMVRSAIQLISSSWPYWNRTEGA DHFFVVPHDFGACFHYQEEKAIERGILPILRHATLVQTFGQRNHVCLNEGSITIPPYAPPQKMQARQIPPDTPRSIFVYFRGLFYDVNNDPEGGYYARGA RAAVWENFKSNPLFDISTEHPTTYYEDMQRAIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEDVPKLDKILTSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 415 Download |
| MRKCLWLWGL LFIALGFAWS ITAERNPRTE RISGSAGDVL EDDPVGRLKV YVYELPSKYN 60 KKILQKDPRC LSHMFAAEIF MHRFLLSSPV RTLNPEEADW FYTPIYATCD LTPTGLPLPF 120 KSPRMVRSAI QLISSSWPYW NRTEGADHFF VVPHDFGACF HYQEEKAIER GILPILRHAT 180 LVQTFGQRNH VCLNEGSITI PPYAPPQKMQ ARQIPPDTPR SIFVYFRGLF YDVNNDPEGG 240 YYARGARAAV WENFKSNPLF DISTEHPTTY YEDMQRAIFC LCPLGWAPWS PRLVEAVVFG 300 CIPVIIADDI VLPFADAIPW EEIGVFVAEE DVPKLDKILT SIPPHVILRK QRLLANPSMK 360 RAMLFPQPTL PGDAFHQILN GLARKLPHPK SVYLKPGEKI LNWTAGPITD LKPW* 420 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam03016 | Exostosin | 5.0e-79 | 47 | 342 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX33320.1 | 0 | 1 | 414 | 1 | 412 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
| RefSeq | NP_174064.1 | 0 | 10 | 414 | 11 | 412 | GUT2; catalytic/ glucuronoxylan glucuronosyltransferase [Arabidopsis thaliana] |
| RefSeq | XP_002284685.1 | 0 | 1 | 414 | 1 | 416 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297880.1 | 0 | 1 | 414 | 1 | 412 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304637.1 | 0 | 1 | 414 | 1 | 413 | predicted protein [Populus trichocarpa] |
