y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G177700.1 |
Family | CBM43 |
Protein Properties | Length: 233 Molecular Weight: 23615 Isoelectric Point: 6.1964 |
Chromosome | Chromosome/Scaffold: 08 Start: 45391619 End: 45393384 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 22 | 99 | 1.8e-31 |
CLCKDGVNEQTLQKTLDYACGAGADCTPINQNGPCYNPNTVKDHCNYAVNSYFQKKGQAQGSCDFSGTATVSVNPPSN |
Full Sequence |
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Protein Sequence Length: 233 Download |
MVPFIYVVLF LAMSGHSSAN YCLCKDGVNE QTLQKTLDYA CGAGADCTPI NQNGPCYNPN 60 TVKDHCNYAV NSYFQKKGQA QGSCDFSGTA TVSVNPPSNI PSTCSFPSSG TSTTPSTGTP 120 TTPTTGTPTS TPTTGTPTTP TTGTPTTGTP TTPTTGTPTT GTSTGIPSTT PTTGTTTGSP 180 TVFGGGTTSL GPSGTTTGIN DPSHAVTLFT STNNNILFTL AVTLWILAYY WA* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-23 | 21 | 91 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-33 | 21 | 99 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU20773.1 | 0 | 1 | 227 | 1 | 213 | unknown [Glycine max] |
EMBL | CAN73948.1 | 0 | 1 | 113 | 1 | 113 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27282.1 | 0 | 1 | 111 | 1 | 111 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284112.1 | 0 | 1 | 231 | 1 | 206 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311337.1 | 0 | 1 | 129 | 1 | 129 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-17 | 17 | 108 | 9 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |