y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G218300.1 |
Family | GH14 |
Protein Properties | Length: 656 Molecular Weight: 74139.1 Isoelectric Point: 5.9461 |
Chromosome | Chromosome/Scaffold: 08 Start: 50463840 End: 50470692 |
Description | beta-amylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 223 | 621 | 0 |
YVKLSTGVINNFCQLADPDGVRQELSHMNSLNVDGVIVDCWWGIVECWNPQKYVWSGYRELFNYIREFKMKIQVVMAFHEYGRTDSADVLISLPNWILEI GKENQDIFFTDREGRRTTEFLSWGIDKERVLNGRTGVEVYFDFMRSFRTEFDDLFAEGLISAVEIGLGPSGELRYPSFSERMGWRYPGIGEFQCYDKYLQ QHLQRAAKLRGHSFWARGPDNAGHYNSRPHETGFFCERGDYDSYYGRFFLHWYAQALMDHADNVLSLANLAFEETKIIVKIPAVYWWYKTSSHAAELTAG YYNPTNQDGYSPVFEVLKKHSVTVKFVCYGLQICSYENDEAFADPEGLSWQVLNSVWDRGLKVAGENTLSCYDKEGCLRIIETAKPRNDPDRRHFSFFV |
Full Sequence |
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Protein Sequence Length: 656 Download |
MESQPQPQPQ PRRPRGFAAT AAAAAASVSP TGTPSGSAGA STASSGKGKR EREKEKERTK 60 LRERHRRAIT SRMLAGLRQY GNFPLPARAD MNDVLAALAR EAGWTVEPDG TTYRHSPPPQ 120 HQQHLGAFPV RSGESPLTAT SLQNCSVKAT LDCQQPVVRI DDSLSPASLD SVVIAERDTR 180 SEKYPSTSPI NSVECLEADQ LIQDVHSTEH DNDFTGTQYV PVYVKLSTGV INNFCQLADP 240 DGVRQELSHM NSLNVDGVIV DCWWGIVECW NPQKYVWSGY RELFNYIREF KMKIQVVMAF 300 HEYGRTDSAD VLISLPNWIL EIGKENQDIF FTDREGRRTT EFLSWGIDKE RVLNGRTGVE 360 VYFDFMRSFR TEFDDLFAEG LISAVEIGLG PSGELRYPSF SERMGWRYPG IGEFQCYDKY 420 LQQHLQRAAK LRGHSFWARG PDNAGHYNSR PHETGFFCER GDYDSYYGRF FLHWYAQALM 480 DHADNVLSLA NLAFEETKII VKIPAVYWWY KTSSHAAELT AGYYNPTNQD GYSPVFEVLK 540 KHSVTVKFVC YGLQICSYEN DEAFADPEGL SWQVLNSVWD RGLKVAGENT LSCYDKEGCL 600 RIIETAKPRN DPDRRHFSFF VYQQPSPLVQ GVICLPDLDY FIKCMHGDIT GDLVP* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 5.0e-102 | 220 | 627 | 416 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 6.0e-117 | 220 | 607 | 393 | + beta-amylase | ||
PLN02801 | PLN02801 | 4.0e-141 | 208 | 648 | 447 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 68 | 653 | 587 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 68 | 653 | 605 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29216.1 | 0 | 59 | 655 | 19 | 612 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001032014.1 | 0 | 8 | 649 | 35 | 682 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002270680.1 | 0 | 52 | 655 | 70 | 670 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304400.1 | 0 | 5 | 647 | 38 | 666 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519919.1 | 0 | 2 | 647 | 22 | 664 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdq_A | 0 | 218 | 609 | 10 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byd_A | 0 | 218 | 609 | 10 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byc_A | 0 | 218 | 609 | 10 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byb_A | 0 | 218 | 609 | 10 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1bya_A | 0 | 218 | 609 | 10 | 401 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EB439624 | 285 | 266 | 550 | 0 |
JG649066 | 276 | 264 | 539 | 0 |
HO807244 | 277 | 371 | 647 | 0 |
GO367915 | 286 | 231 | 516 | 0 |
EY757606 | 284 | 266 | 546 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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