y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G230100.1 |
Family | GH14 |
Protein Properties | Length: 541 Molecular Weight: 60773.1 Isoelectric Point: 8.557 |
Chromosome | Chromosome/Scaffold: 08 Start: 51641062 End: 51644006 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 84 | 498 | 0 |
YVMLPLDTITLGGSLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYTELVKMVEKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNQDLVYTDRLGRRNPEYISLGCDSVPVLRGRTPIQAYTDYMRSFRERFRDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWKFPGIGEFQCHDKYMR ASLEAAAEAIGQKDWGKGGPHDSGHYKQVPEETGFFKRDGTWNTEYGQFFLEWYSRKLLEHGDRILAAAKGTFHGTGAKLSAKVAGIHWHYRTRSHAAEL TAGYYNTRHHDGYLPIAQMFSKHGVVFNFTCMEMRDGEQPEYANCSPEGLVRQVKMATKIARVELAGENALERYDAGSYAQVLATSRSDSGNGLSAFTYL RMNKRLFEGDNWRHL |
Full Sequence |
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Protein Sequence Length: 541 Download |
MALTLRSSTS FIKLKETNNF KTPDDFLGSI SFAQMKPSCR IRARNSMSMQ EAPLVHGKIS 60 TKETEKLYSL TISHAENNSK VPVYVMLPLD TITLGGSLNK PRAMNASLMA LKSAGVEGVM 120 VDAWWGLVEK DGPLNYNWEG YTELVKMVEK HGLKLQVVMS FHQCGGNVGD SCSIPLPPWV 180 LEEISKNQDL VYTDRLGRRN PEYISLGCDS VPVLRGRTPI QAYTDYMRSF RERFRDYLGR 240 VIVEIQVGMG PCGELRYPSY PESNGTWKFP GIGEFQCHDK YMRASLEAAA EAIGQKDWGK 300 GGPHDSGHYK QVPEETGFFK RDGTWNTEYG QFFLEWYSRK LLEHGDRILA AAKGTFHGTG 360 AKLSAKVAGI HWHYRTRSHA AELTAGYYNT RHHDGYLPIA QMFSKHGVVF NFTCMEMRDG 420 EQPEYANCSP EGLVRQVKMA TKIARVELAG ENALERYDAG SYAQVLATSR SDSGNGLSAF 480 TYLRMNKRLF EGDNWRHLVE FVKNMSEGGR KISECDSRGT NLYIGFIKDK TVEKKEVALV 540 * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 4.0e-147 | 81 | 505 | 432 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 1.0e-174 | 84 | 501 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02803 | PLN02803 | 0 | 1 | 540 | 550 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 41 | 508 | 476 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 0 | 81 | 505 | 433 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62440.1 | 0 | 1 | 540 | 1 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 540 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 540 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 540 | 1 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 540 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 81 | 505 | 12 | 441 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 1q6c_A | 0 | 81 | 505 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 81 | 505 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1ukp_D | 0 | 81 | 505 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 81 | 505 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU103692 | 543 | 1 | 535 | 0 |
HO794833 | 412 | 119 | 528 | 0 |
HO781538 | 406 | 30 | 428 | 0 |
CO087014 | 299 | 179 | 477 | 0 |
ES830803 | 387 | 114 | 496 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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