Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.008G260100.2 |
Family | GT5 |
Protein Properties | Length: 579 Molecular Weight: 64104.7 Isoelectric Point: 6.8346 |
Chromosome | Chromosome/Scaffold: 08 Start: 54136210 End: 54139724 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT5 | 54 | 550 | 0 |
LVFVGAECGPWSKTGGLGDVLGGLPPAMAANGHRVMTVSPRYDQYMDAWDTSVLVEVKVGDKIETARFFHCYKRGVDRVFVDHPMFLEKVWGKTGSKIYG PNAGVDYKDNQLRFSLLCQAAMEAPKVLNLNSNRYFSGPYGEDVIFIANDWHTGLLPCYLKSMYQSRGIYMNAKVAFCIHNIAYQGRFPFSDFSVLNLPD RFKSSFDFFDGYPKPIKGRKINWMKAGILESDKVLTVSPYYAQELISGEDKGVELDNIIRKTGITGIVNGMDVQEWNPATDQHINVQYDASTVMDAKPIL KESLQAEMGLHCDRNVPVVGFIGRLEEQKGSDVLAEAIPRFIRENCQIVILGTGKMAMEEQIENLETQYPDKARGIANFNVPLAHKIIAGSDFILIPSRF EPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDAVDPSDLDKVAKTVRKALATYGTPTMNEMIQNCMAQDLSWKGPSKLWEKLL |
Full Sequence |
---|
Protein Sequence Length: 579 Download |
MKNQAAMTHN GLRFLNMLDR LQMRTNAKAV ARQAVKQENP RPWGKIICGK GLNLVFVGAE 60 CGPWSKTGGL GDVLGGLPPA MAANGHRVMT VSPRYDQYMD AWDTSVLVEV KVGDKIETAR 120 FFHCYKRGVD RVFVDHPMFL EKVWGKTGSK IYGPNAGVDY KDNQLRFSLL CQAAMEAPKV 180 LNLNSNRYFS GPYGEDVIFI ANDWHTGLLP CYLKSMYQSR GIYMNAKVAF CIHNIAYQGR 240 FPFSDFSVLN LPDRFKSSFD FFDGYPKPIK GRKINWMKAG ILESDKVLTV SPYYAQELIS 300 GEDKGVELDN IIRKTGITGI VNGMDVQEWN PATDQHINVQ YDASTVMDAK PILKESLQAE 360 MGLHCDRNVP VVGFIGRLEE QKGSDVLAEA IPRFIRENCQ IVILGTGKMA MEEQIENLET 420 QYPDKARGIA NFNVPLAHKI IAGSDFILIP SRFEPCGLIQ LHAMRYGTVP IVASTGGLVD 480 TVKEGFTGFQ MGAFNVECDA VDPSDLDKVA KTVRKALATY GTPTMNEMIQ NCMAQDLSWK 540 GPSKLWEKLL LSLEVAGSEP GNEGEEIAPL AKENVATP* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 2.0e-88 | 57 | 542 | 507 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 1.0e-108 | 53 | 539 | 505 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 9.0e-134 | 52 | 539 | 499 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 9.0e-166 | 52 | 542 | 499 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 5.0e-176 | 53 | 540 | 501 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACH72975.1 | 0 | 1 | 578 | 35 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
GenBank | ACJ11735.1 | 0 | 2 | 578 | 33 | 609 | granule bound starch synthase [Gossypium hirsutum] |
GenBank | ACJ11751.1 | 0 | 2 | 578 | 33 | 609 | granule bound starch synthase [Gossypium hirsutum] |
GenBank | ACM78591.1 | 0 | 1 | 578 | 35 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
GenBank | ACV72639.1 | 0 | 2 | 578 | 33 | 609 | granule-bound starch synthase 1 [Gossypium hirsutum] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 52 | 578 | 10 | 536 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3vue_A | 0 | 52 | 578 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 52 | 554 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 52 | 555 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 52 | 555 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
AJ568414 | 579 | 1 | 579 | 0 |
HO629148 | 580 | 5 | 579 | 0 |
HO825853 | 518 | 60 | 577 | 0 |
HO778340 | 399 | 23 | 419 | 0 |
CN831271 | 382 | 198 | 579 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|