| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.008G282700.1 |
| Family | GH29 |
| Protein Properties | Length: 487 Molecular Weight: 55093.9 Isoelectric Point: 7.9231 |
| Chromosome | Chromosome/Scaffold: 08 Start: 55897316 End: 55900320 |
| Description | alpha-L-fucosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH29 | 41 | 342 | 0 |
| SQLKWQQRELIMFLHFGVNTFTDSELGTGKENPSIFNPVGLDTKQWVTVAAEAGISLMILTAKHHDGFCLWPSKYTDHSVISSPWRNGHGDVVQEFIDAV KTHGGGGIDAGLYLSPWDRHDKRYGHDLQYNEYYLAQLQELLSKYGSVKEIWFDGFKGKEARNMSYYFSDWFAMVRELQSSINIFSDAGPDVRWVGNEKG SAGNTSWSTINSTLLSIGNLSVLDYLNTGDPKGTNWLPAECDVSIREGWFWHKSQSPKMLSQLLDIYYKSVGRNCVMLLNVPPNSTGLISESDIHRLKEF RT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 487 Download |
| MAKFWYLVCM ITFLELSKLA ISRPEQVPTP PLPVLPLPTF SQLKWQQREL IMFLHFGVNT 60 FTDSELGTGK ENPSIFNPVG LDTKQWVTVA AEAGISLMIL TAKHHDGFCL WPSKYTDHSV 120 ISSPWRNGHG DVVQEFIDAV KTHGGGGIDA GLYLSPWDRH DKRYGHDLQY NEYYLAQLQE 180 LLSKYGSVKE IWFDGFKGKE ARNMSYYFSD WFAMVRELQS SINIFSDAGP DVRWVGNEKG 240 SAGNTSWSTI NSTLLSIGNL SVLDYLNTGD PKGTNWLPAE CDVSIREGWF WHKSQSPKML 300 SQLLDIYYKS VGRNCVMLLN VPPNSTGLIS ESDIHRLKEF RTAIDTIFST NLAEKCTVKV 360 SSQRGGKGGG FGPENVLDND HVWTYWSPKE NKNEHWIEIK VPNAEEGMKF NVVRIQEPIG 420 LGQRIIKHEI YVDGKKVVQG TTVGYKRLHR LEKVLHCRVV RIIVKESKGL PLISSTGLHL 480 DPYWKP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00754 | F5_F8_type_C | 0.008 | 357 | 436 | 83 | + F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. | ||
| pfam01120 | Alpha_L_fucos | 9.0e-28 | 76 | 340 | 287 | + Alpha-L-fucosidase. | ||
| smart00812 | Alpha_L_fucos | 1.0e-28 | 76 | 340 | 284 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
| COG3669 | COG3669 | 3.0e-55 | 42 | 478 | 453 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004560 | alpha-L-fucosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0007155 | cell adhesion |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002270630.1 | 0 | 41 | 486 | 22 | 462 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002270674.1 | 0 | 29 | 486 | 7 | 461 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318264.1 | 0 | 1 | 486 | 1 | 482 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322431.1 | 0 | 1 | 486 | 1 | 483 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510887.1 | 0 | 1 | 486 | 1 | 483 | alpha-l-fucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3eyp_B | 0 | 33 | 479 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3eyp_A | 0 | 33 | 479 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3mo4_B | 0 | 38 | 474 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3mo4_A | 0 | 38 | 474 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3ues_B | 0 | 38 | 474 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
