Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.009G027100.1 |
Family | GT47 |
Protein Properties | Length: 636 Molecular Weight: 72212.2 Isoelectric Point: 9.9348 |
Chromosome | Chromosome/Scaffold: 09 Start: 2064046 End: 2067038 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 306 | 586 | 0 |
ILKVYIYKEGVKPIFHLPKMRGIYASEGWFMKLMEGNKKFVVKDPRRAHLFYLPFSSNMLRSALNGQDFQHVKDLQKYLKDYVELIAGKYSFWNRTGGAD HFLVACHDWAINLTKNIRSCIRALCNSNAAKGFEIGKDTTLPVTYIRSMEAPLENLGGKPPSERNILAFFAGGMHGYLRPILLQYWQNKESDMKIFGPMP RDVEGKRKYREHMKSSKYCICAKGYEVHTPRVVESIYYECVPVIISDNYVPPFFEVLNWEAFAILVQEKDIPSLRNILLSI |
Full Sequence |
---|
Protein Sequence Length: 636 Download |
MGVFALTLRL FHAEVRKLLL IIGLAVSFII LFQCFSFSYG KIFVPSPTSK ISVVKLVSNA 60 TTLNDSNMAE LFVNVVANDT NGSDPEEEAR YKHNTLEANT GSDSSSEVNR YLDGSFSKFK 120 DQNSHERKSK PRITQGKSLM SGYITSTDDG STKVMVEIAK NSEKMINGPK PTTDYGGVVP 180 FISAIVAAKG LQSSNLSSGT SSSLLGANLP SQRNAETSIG TQHTNFKPLQ IESAISVSQM 240 NSLLLQSIDS SRSLRPRRSS ARDRELLSAR QEIGNARVSR KVPVLHASVY QNISKFERSY 300 EMMEQILKVY IYKEGVKPIF HLPKMRGIYA SEGWFMKLME GNKKFVVKDP RRAHLFYLPF 360 SSNMLRSALN GQDFQHVKDL QKYLKDYVEL IAGKYSFWNR TGGADHFLVA CHDWAINLTK 420 NIRSCIRALC NSNAAKGFEI GKDTTLPVTY IRSMEAPLEN LGGKPPSERN ILAFFAGGMH 480 GYLRPILLQY WQNKESDMKI FGPMPRDVEG KRKYREHMKS SKYCICAKGY EVHTPRVVES 540 IYYECVPVII SDNYVPPFFE VLNWEAFAIL VQEKDIPSLR NILLSIPEEK YLEMHARVKL 600 VQRHFLWHKR PVKYDLFHMI LHSVWYNRVF HIKTR* |
Functional Domains Download unfiltered results here | ||||||
---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam03016 | Exostosin | 9.0e-63 | 307 | 586 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08970.1 | 0 | 233 | 635 | 152 | 559 | unnamed protein product [Arabidopsis thaliana] |
EMBL | CAN76867.1 | 0 | 1 | 633 | 1 | 711 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 0 | 13 | 631 | 722 | 1390 | hypothetical protein [Vitis vinifera] |
EMBL | CBI28021.1 | 0 | 1 | 635 | 1 | 665 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280595.1 | 0 | 5 | 635 | 3 | 663 | PREDICTED: hypothetical protein [Vitis vinifera] |