Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G027100.3 |
Family | GT47 |
Protein Properties | Length: 585 Molecular Weight: 66837 Isoelectric Point: 9.9517 |
Chromosome | Chromosome/Scaffold: 09 Start: 2064217 End: 2067038 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 255 | 535 | 0 |
ILKVYIYKEGVKPIFHLPKMRGIYASEGWFMKLMEGNKKFVVKDPRRAHLFYLPFSSNMLRSALNGQDFQHVKDLQKYLKDYVELIAGKYSFWNRTGGAD HFLVACHDWAINLTKNIRSCIRALCNSNAAKGFEIGKDTTLPVTYIRSMEAPLENLGGKPPSERNILAFFAGGMHGYLRPILLQYWQNKESDMKIFGPMP RDVEGKRKYREHMKSSKYCICAKGYEVHTPRVVESIYYECVPVIISDNYVPPFFEVLNWEAFAILVQEKDIPSLRNILLSI |
Full Sequence |
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Protein Sequence Length: 585 Download |
MGVFALTLRL FHAEVRKLLL IIGLAVSFII LFQCFSFSYG KIFVPSPTSK ISVVKLVSNA 60 TTLNDSNMAE LFVNVVANDT NGSDPEEEAR YKHNTLEANT GSDSSSEVNR YLDGSFSKFK 120 DQNSHERKSK PRITQVAAKG LQSSNLSSGT SSSLLGANLP SQRNAETSIG TQHTNFKPLQ 180 IESAISVSQM NSLLLQSIDS SRSLRPRRSS ARDRELLSAR QEIGNARVSR KVPVLHASVY 240 QNISKFESYE MMEQILKVYI YKEGVKPIFH LPKMRGIYAS EGWFMKLMEG NKKFVVKDPR 300 RAHLFYLPFS SNMLRSALNG QDFQHVKDLQ KYLKDYVELI AGKYSFWNRT GGADHFLVAC 360 HDWAINLTKN IRSCIRALCN SNAAKGFEIG KDTTLPVTYI RSMEAPLENL GGKPPSERNI 420 LAFFAGGMHG YLRPILLQYW QNKESDMKIF GPMPRDVEGK RKYREHMKSS KYCICAKGYE 480 VHTPRVVESI YYECVPVIIS DNYVPPFFEV LNWEAFAILV QEKDIPSLRN ILLSIPEEKY 540 LEMHARVKLV QRHFLWHKRP VKYDLFHMIL HSVWYNRVFH IKTR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-62 | 256 | 535 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08970.1 | 0 | 183 | 584 | 152 | 559 | unnamed protein product [Arabidopsis thaliana] |
EMBL | CAN76867.1 | 0 | 1 | 582 | 1 | 711 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 0 | 204 | 580 | 1012 | 1390 | hypothetical protein [Vitis vinifera] |
EMBL | CBI28021.1 | 0 | 1 | 584 | 1 | 665 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280595.1 | 0 | 5 | 584 | 3 | 663 | PREDICTED: hypothetical protein [Vitis vinifera] |