Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G027100.4 |
Family | GT47 |
Protein Properties | Length: 499 Molecular Weight: 57544.3 Isoelectric Point: 10.1461 |
Chromosome | Chromosome/Scaffold: 09 Start: 2064217 End: 2067038 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 169 | 449 | 0 |
ILKVYIYKEGVKPIFHLPKMRGIYASEGWFMKLMEGNKKFVVKDPRRAHLFYLPFSSNMLRSALNGQDFQHVKDLQKYLKDYVELIAGKYSFWNRTGGAD HFLVACHDWAINLTKNIRSCIRALCNSNAAKGFEIGKDTTLPVTYIRSMEAPLENLGGKPPSERNILAFFAGGMHGYLRPILLQYWQNKESDMKIFGPMP RDVEGKRKYREHMKSSKYCICAKGYEVHTPRVVESIYYECVPVIISDNYVPPFFEVLNWEAFAILVQEKDIPSLRNILLSI |
Full Sequence |
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Protein Sequence Length: 499 Download |
MLRYKHNTLE ANTGSDSSSE VNRYLDGSFS KFKDQNSHER KSKPRITQVA AKGLQSSNLS 60 SGTSSSLLGA NLPSQRNAET SIGTQHTNFK PLQIESAISV SQMNSLLLQS IDSSRSLRPR 120 RSSARDRELL SARQEIGNAR VSRKVPVLHA SVYQNISKFE RSYEMMEQIL KVYIYKEGVK 180 PIFHLPKMRG IYASEGWFMK LMEGNKKFVV KDPRRAHLFY LPFSSNMLRS ALNGQDFQHV 240 KDLQKYLKDY VELIAGKYSF WNRTGGADHF LVACHDWAIN LTKNIRSCIR ALCNSNAAKG 300 FEIGKDTTLP VTYIRSMEAP LENLGGKPPS ERNILAFFAG GMHGYLRPIL LQYWQNKESD 360 MKIFGPMPRD VEGKRKYREH MKSSKYCICA KGYEVHTPRV VESIYYECVP VIISDNYVPP 420 FFEVLNWEAF AILVQEKDIP SLRNILLSIP EEKYLEMHAR VKLVQRHFLW HKRPVKYDLF 480 HMILHSVWYN RVFHIKTR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-63 | 170 | 449 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08970.1 | 0 | 96 | 498 | 152 | 559 | unnamed protein product [Arabidopsis thaliana] |
EMBL | CAN76867.1 | 0 | 2 | 496 | 149 | 711 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 0 | 117 | 494 | 1012 | 1390 | hypothetical protein [Vitis vinifera] |
EMBL | CBI28021.1 | 0 | 2 | 498 | 149 | 665 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280595.1 | 0 | 2 | 498 | 147 | 663 | PREDICTED: hypothetical protein [Vitis vinifera] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG217834 | 296 | 208 | 497 | 0 |
EX272008 | 266 | 216 | 480 | 0 |
ES808098 | 337 | 133 | 468 | 0 |
GO261722 | 259 | 191 | 448 | 0 |
EX272008 | 41 | 452 | 492 | 0.26 |
Sequence Alignments (This image is cropped. Click for full image.) |
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