Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G038900.1 |
Family | CE8 |
Protein Properties | Length: 595 Molecular Weight: 66495 Isoelectric Point: 5.4118 |
Chromosome | Chromosome/Scaffold: 09 Start: 2853806 End: 2855684 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 286 | 578 | 0 |
NITVAKDGSGDFRTISEAVELIPKKKKTRFVIYVKEGVYLENVSIDKDYWNVMIYGDGMYKTIVSGSLNKVDGTPTFSSGTLLAAGRRFIARDMGFINTA GPEKEQAVAMRSSSDQSVFYRCYFDAYQDTLYVHSNRQFYRDCHVTGTVDFIFGNAAVVLQNCSIQPRQPGPDQFNTITAQSKTDPNQNTGISIQRCQIT PFDNLTATTYLGRPWKDFATTMFMQSHIGDVVDPAGWTQWTQGVDPPNTIFYAEYENLGPGSGINERRNWPGVKPNVTTEEARRFTVESLIQG |
Full Sequence |
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Protein Sequence Length: 595 Download |
MDSMKSFQSY CKADELEEQA YRRRTRKRLI IIGLSTIVLI AIIIGAVFGT LFPVKSSKSN 60 ENPPTYTAES IKAICDVTRY PDSCGSSIAA IRSSSNDTDP NPGPSKVFTL SMQVAVGELI 120 RLSSLPQKII SSNVNIDPMV REELEICENL FEDAVEYIND SISAVQGGQG DEMVLSTAKI 180 NDIKTWLSSA ITNQETCLDG LMEAANHAAI PQEMENATRN STEFSSNSLA IATHIMTILQ 240 SFQVPIHRKL LKFDRHHHGL EFDPRFPLWV RRGDRRLLQE ENPIPNITVA KDGSGDFRTI 300 SEAVELIPKK KKTRFVIYVK EGVYLENVSI DKDYWNVMIY GDGMYKTIVS GSLNKVDGTP 360 TFSSGTLLAA GRRFIARDMG FINTAGPEKE QAVAMRSSSD QSVFYRCYFD AYQDTLYVHS 420 NRQFYRDCHV TGTVDFIFGN AAVVLQNCSI QPRQPGPDQF NTITAQSKTD PNQNTGISIQ 480 RCQITPFDNL TATTYLGRPW KDFATTMFMQ SHIGDVVDPA GWTQWTQGVD PPNTIFYAEY 540 ENLGPGSGIN ERRNWPGVKP NVTTEEARRF TVESLIQGNQ WLPKDSMVYE SSLE* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 2.0e-155 | 34 | 593 | 575 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 2.0e-155 | 7 | 582 | 604 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 5.0e-177 | 286 | 579 | 299 | + Pectinesterase. | ||
PLN02314 | PLN02314 | 0 | 1 | 593 | 599 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 7 | 593 | 592 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002265217.1 | 0 | 1 | 593 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 1 | 593 | 1 | 588 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326318.1 | 0 | 1 | 593 | 1 | 596 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516194.1 | 0 | 64 | 593 | 68 | 599 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002532945.1 | 0 | 1 | 593 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 284 | 593 | 2 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 285 | 593 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 1e-19 | 297 | 583 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-19 | 297 | 583 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-19 | 297 | 583 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |