| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G039100.1 |
| Family | CE8 |
| Protein Properties | Length: 568 Molecular Weight: 62126.2 Isoelectric Point: 7.364 |
| Chromosome | Chromosome/Scaffold: 09 Start: 2865004 End: 2867576 |
| Description | pectin methylesterase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 256 | 551 | 0 |
| NVTVAADGSGDFLTVSEAVAAAPERSTTRYIIKIKAGVYSENVDVPRKKTNLMFVGDGRVNTIITASRNVVDGSTTFHSATVAAVGDGFLARDITFQNTA GPSKHQAVALRVGSDLSAFYRCDILAYQDTLYVHSLRQFYSQCLVAGTVDFIFGNAAAVLQDCDIHARRPNPNQRNMVTAQGRSDPNENTGIVIQKCRIG ATSDLEAVKSDFATYLGRPWKTHSRTVIMQSVISDIIHPAGWFPWDKDFALDTLTYREYQNTGPGANTSSRVTWKGYSVITNISEAQTYTARNFIG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 568 Download |
| MAISGDRKKK LFLALFASIL LVTAIVTIAT TVSVSKKKSS NTAAAHSIIK SSCSSTLYPE 60 LCYSTISSAP HAETKVKNPK DVIEMSLNLT VTAVQSNYLS IKKLISTRRK SLTEREKAAL 120 NDCLELVDET LDELLVAEHD LSDYPSFNKS ISQHAEDLKS LLSAAMTNQE TCLDGFSHDK 180 ADKKVRQALL DGQMHVFHMC SNALAMIKNL TDTDMASQGY HPSSGRQLEE EDQTEWPKWL 240 SAGDRRLLQA TTVIPNVTVA ADGSGDFLTV SEAVAAAPER STTRYIIKIK AGVYSENVDV 300 PRKKTNLMFV GDGRVNTIIT ASRNVVDGST TFHSATVAAV GDGFLARDIT FQNTAGPSKH 360 QAVALRVGSD LSAFYRCDIL AYQDTLYVHS LRQFYSQCLV AGTVDFIFGN AAAVLQDCDI 420 HARRPNPNQR NMVTAQGRSD PNENTGIVIQ KCRIGATSDL EAVKSDFATY LGRPWKTHSR 480 TVIMQSVISD IIHPAGWFPW DKDFALDTLT YREYQNTGPG ANTSSRVTWK GYSVITNISE 540 AQTYTARNFI GGANWLNATG FPFSLDL* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02933 | PLN02933 | 4.0e-163 | 55 | 567 | 528 | + Probable pectinesterase/pectinesterase inhibitor |
| PLN02745 | PLN02745 | 2.0e-166 | 48 | 567 | 529 | + Putative pectinesterase/pectinesterase inhibitor |
| PLN02301 | PLN02301 | 2.0e-176 | 47 | 564 | 520 | + pectinesterase/pectinesterase inhibitor |
| PLN02313 | PLN02313 | 0 | 46 | 567 | 533 | + Pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 0 | 256 | 552 | 297 | + Pectinesterase. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK84485.1 | 0 | 48 | 567 | 110 | 631 | putative thermostable pectinesterase [Citrus sinensis] |
| RefSeq | XP_002265171.1 | 0 | 35 | 567 | 80 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002273402.1 | 0 | 32 | 567 | 40 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304257.1 | 0 | 38 | 567 | 52 | 579 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002324773.1 | 0 | 35 | 567 | 43 | 573 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 249 | 567 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 253 | 563 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-21 | 250 | 475 | 1 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-21 | 250 | 475 | 1 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-21 | 250 | 475 | 1 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
