y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G051500.3 |
Family | GT43 |
Protein Properties | Length: 444 Molecular Weight: 50226.2 Isoelectric Point: 7.6811 |
Chromosome | Chromosome/Scaffold: 09 Start: 3700288 End: 3702542 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 211 | 419 | 0 |
LAYTLKLVQPPLLWIVVEMTLQSDETADILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFADEHNIYSIDLFEQMRHIRQFGTWP VAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIERVVQDESQMEGLPHDCS RVMVWELNV |
Full Sequence |
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Protein Sequence Length: 444 Download |
MASIRRTLSP VPRQGTLITG EAERSVPSPL SKSSSCSQSS PATGGLLSSL FGLSDSQALV 60 FGVFSPRSFR PLDRAKQKGQ VWRRVVFQFF ICFIIGFLIG FTPFISMDFS YMNPVSKHQA 120 FSFEVVSTAG NFQSLNNSQR NVASTMNNPG VENNFTLEGL VQRQEMTEGN LDDASTNQSV 180 PQDIDLESRK LLIIVTPTYA RSFQAYYLNL LAYTLKLVQP PLLWIVVEMT LQSDETADIL 240 RRSGVMYRHL VCKKNLTDIK DRSVHQRNVA LSHIETHHLD GIVYFADEHN IYSIDLFEQM 300 RHIRQFGTWP VAKQTSDKSR AVLEGPVCNG TQVIGWHLNG LSKRFQRFHA EMSGFAFNST 360 ILWDPKPWHR PTLEPIRQLD TVEDGFHASS FIERVVQDES QMEGLPHDCS RVMVWELNVE 420 SPNSFYPKKW SMKNNLDIIA PLA* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 5.0e-65 | 211 | 421 | 220 | + Glycosyltransferase family 43. | ||
PLN02458 | PLN02458 | 2.0e-79 | 72 | 419 | 353 | + transferase, transferring glycosyl groups | ||
cd00218 | GlcAT-I | 9.0e-94 | 190 | 420 | 237 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU18893.1 | 0 | 1 | 442 | 1 | 430 | unknown [Glycine max] |
EMBL | CAN81600.1 | 0 | 183 | 443 | 5 | 265 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20871.1 | 0 | 1 | 443 | 1 | 448 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309550.1 | 0 | 1 | 443 | 1 | 442 | glycosyl transferase [Populus trichocarpa] |
RefSeq | XP_002516557.1 | 0 | 1 | 443 | 1 | 438 | beta-1,3-glucuronyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3cu0_B | 2e-22 | 188 | 423 | 19 | 261 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |
PDB | 3cu0_A | 2e-22 | 188 | 423 | 19 | 261 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |
PDB | 1v84_B | 2e-22 | 194 | 422 | 7 | 236 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |
PDB | 1v84_A | 2e-22 | 194 | 422 | 7 | 236 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |
PDB | 1v83_B | 2e-22 | 194 | 422 | 7 | 236 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |