Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G059300.1 |
Family | GT47 |
Protein Properties | Length: 460 Molecular Weight: 53450.1 Isoelectric Point: 9.1657 |
Chromosome | Chromosome/Scaffold: 09 Start: 4262284 End: 4264601 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 127 | 410 | 0 |
QKRFRVWTYKEGDSPLFHNGPVNDIYSIEGQFIDELESDISPFLARSPDEALAFFLPVSVVNIIKYVYRPYTNYSRERLQHIVKDYIGIVSTRYPYWNRS NGADHFMISCHDWAPDVSAKDPKLFKNFIRVLCNANSSEGFKPERDVSMPEVYIRFGALAQSQKNRPPNNRSILAFFAGGEHGDVRKILFKYWEKKDNDI RVFRYLPKTLNYTELISQSKFCLCPSGYEVASPRVVESILSGCVPVIVSDHYVLPFSDVLDWSKFSVYVPIAKIPEIKTILQGI |
Full Sequence |
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Protein Sequence Length: 460 Download |
MADPSCTIPF FVYPSIFLIL FFTSINHHYR LYSFSSVISN HTKVSRENYS DISNSHTPIS 60 SAPDFHNDAQ KKIQIEVLEE ELAMAREAIR AAFRSRSYTS NRPESYVPKG SVYRNPYAFH 120 QSHIEMQKRF RVWTYKEGDS PLFHNGPVND IYSIEGQFID ELESDISPFL ARSPDEALAF 180 FLPVSVVNII KYVYRPYTNY SRERLQHIVK DYIGIVSTRY PYWNRSNGAD HFMISCHDWA 240 PDVSAKDPKL FKNFIRVLCN ANSSEGFKPE RDVSMPEVYI RFGALAQSQK NRPPNNRSIL 300 AFFAGGEHGD VRKILFKYWE KKDNDIRVFR YLPKTLNYTE LISQSKFCLC PSGYEVASPR 360 VVESILSGCV PVIVSDHYVL PFSDVLDWSK FSVYVPIAKI PEIKTILQGI SQEEYLEKQR 420 KVLKVQRHFV LNRPAKPYDI MHMVMHSVWL RRLNRRLSD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-62 | 126 | 410 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI21065.1 | 0 | 70 | 457 | 10 | 400 | unnamed protein product [Vitis vinifera] |
EMBL | CBI25537.1 | 0 | 72 | 454 | 85 | 472 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | Q9LFP3 | 0 | 1 | 457 | 1 | 476 | GLYT4_ARATH RecName: Full=Probable glycosyltransferase At5g11130 |
RefSeq | XP_002324873.1 | 0 | 126 | 457 | 1 | 333 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515488.1 | 0 | 1 | 458 | 12 | 469 | catalytic, putative [Ricinus communis] |