Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G081100.1 |
Family | GH3 |
Protein Properties | Length: 631 Molecular Weight: 69272.4 Isoelectric Point: 7.1919 |
Chromosome | Chromosome/Scaffold: 09 Start: 5862013 End: 5865148 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 107 | 341 | 0 |
STRLGIPMIYGIDAVHGHNNVYKATIFPHNIGLGATRDPELVKRIGSATAREVRATGINYVFAPCIAVCRDPRWGRCFESYSEDPDIVKEMTEIINGLQG EIPKDSRKGVPYVGGKDKVVACAKHFVGDGGTTRGINENNTVIDKHGLLSIHMPGYNAAIIKGVGTVMVSYSSWNGVKMHANHDLVTNFLKGALRFRGFV ISDWQAIDRMTYPVHANYTYSVLTGVQAGLDMIMV |
Full Sequence |
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Protein Sequence Length: 631 Download |
MGKTSVLLVG FLFSFLVATV QAGDKYKKYN DPSLPINKRI RDLMRRMSLD EKIGQMVQID 60 RKVATPEVMR DYKIGSILSG GGSVPHLQAT PQEWLNMVNG FQNGSLSTRL GIPMIYGIDA 120 VHGHNNVYKA TIFPHNIGLG ATRDPELVKR IGSATAREVR ATGINYVFAP CIAVCRDPRW 180 GRCFESYSED PDIVKEMTEI INGLQGEIPK DSRKGVPYVG GKDKVVACAK HFVGDGGTTR 240 GINENNTVID KHGLLSIHMP GYNAAIIKGV GTVMVSYSSW NGVKMHANHD LVTNFLKGAL 300 RFRGFVISDW QAIDRMTYPV HANYTYSVLT GVQAGLDMIM VPYNYTEFID TLTGLVKNKF 360 IPMSRIDDAV RRILRVKFQL GLFENPLSDE SFIDQLGHQA HRDLAREAVR KSLVLLKNGE 420 NADEPMLPLP KKSSKILVAG SHADDLGNQC GGWTINWQGG SGNNLTSGTT ILKGIAEAVD 480 PSTEIVYEEN PEFDYVKANN FSYGIVVVGE LPYAETNGDN LNLTIPLQGQ YTLYNVCANI 540 KCVVVLISGR PLVIMPHLEQ VDALVAAWLP GTEGQGVADV LFGDYGFSGK LPRTWFKTAE 600 QLPMNVGDLN YDPLYPFGYG LTTQPLNATS * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-43 | 31 | 622 | 662 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-49 | 413 | 622 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 8.0e-90 | 40 | 622 | 662 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 4.0e-94 | 48 | 376 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 3.0e-94 | 47 | 456 | 426 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39076.1 | 0 | 25 | 628 | 24 | 635 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266470.1 | 0 | 25 | 628 | 24 | 627 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266589.1 | 0 | 1 | 629 | 1 | 628 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266675.1 | 0 | 1 | 629 | 1 | 628 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002523937.1 | 0 | 1 | 625 | 1 | 621 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 26 | 629 | 2 | 602 | A Chain A, Three-Dimensional Structure Of Acylphosphatase. Refinement And Structure Analysis |
PDB | 1x38_A | 0 | 26 | 629 | 2 | 602 | A Chain A, Three-Dimensional Structure Of Acylphosphatase. Refinement And Structure Analysis |
PDB | 1lq2_A | 0 | 26 | 629 | 2 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 26 | 629 | 2 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 26 | 629 | 2 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |