Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.009G085300.8 |
Family | GH17 |
Protein Properties | Length: 293 Molecular Weight: 32674 Isoelectric Point: 5.2971 |
Chromosome | Chromosome/Scaffold: 09 Start: 6204332 End: 6207731 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 3 | 256 | 0 |
DPIKAQNWIQQRVQPYLTRTKITCITVGNEVYKTYDHQLWSNLLPAMQTVYNTLVNLGLDKQVTVTTAHSLDILSLSFPPSVGAFRQDLGEYLHGILNFH AQVKSPFLINAYPYFAYKDKPNEVPLNYVLFQPNQGTMDPSTNLKYDNMLFAQIDAVYSAIKAMGHTDIEVRISETGWPSRGDENEVGATPENAGLYNGN LLRRIEEKQGTPAKPNVPIDIYVFALFNENQKPGPTSERNYGLFYPDGTPVYNI |
Full Sequence |
---|
Protein Sequence Length: 293 Download |
MTDPIKAQNW IQQRVQPYLT RTKITCITVG NEVYKTYDHQ LWSNLLPAMQ TVYNTLVNLG 60 LDKQVTVTTA HSLDILSLSF PPSVGAFRQD LGEYLHGILN FHAQVKSPFL INAYPYFAYK 120 DKPNEVPLNY VLFQPNQGTM DPSTNLKYDN MLFAQIDAVY SAIKAMGHTD IEVRISETGW 180 PSRGDENEVG ATPENAGLYN GNLLRRIEEK QGTPAKPNVP IDIYVFALFN ENQKPGPTSE 240 RNYGLFYPDG TPVYNIGVQG YLPELIYSSA TTNNGFSICS LLVLAIAYLI SS* 300 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-5 | 11 | 249 | 248 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-75 | 2 | 256 | 255 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94377.1 | 0 | 1 | 292 | 88 | 379 | unknown [Populus trichocarpa] |
GenBank | ACU21124.1 | 0 | 1 | 287 | 98 | 390 | unknown [Glycine max] |
RefSeq | NP_001031432.1 | 0 | 2 | 290 | 14 | 304 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002328249.1 | 0 | 1 | 280 | 90 | 370 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 1 | 274 | 74 | 347 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 1 | 256 | 63 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 1 | 256 | 63 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_B | 0 | 1 | 256 | 63 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_A | 0 | 1 | 256 | 63 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3em5_D | 0 | 1 | 256 | 63 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EG514593 | 267 | 6 | 272 | 0 |
AM720156 | 247 | 44 | 290 | 0 |
CU510346 | 222 | 1 | 222 | 0 |
GR996037 | 259 | 1 | 259 | 0 |
EH686314 | 269 | 5 | 273 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|