Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G093600.1 |
Family | GH3 |
Protein Properties | Length: 615 Molecular Weight: 67894.5 Isoelectric Point: 5.8595 |
Chromosome | Chromosome/Scaffold: 09 Start: 6825751 End: 6830712 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 90 | 324 | 0 |
DSRLGIPLAYGIDAVHGNNRFYGATIFPHNIGLGATGDADLAQRIGAAVALEVRASGIHFNFAPCVAVCRDPRWGRCYESFSEDTNIVRKMTSIITGLQG QPPVGHSKGYPFVAGRYNVIACAKHFVGDGGTEKGINEGNTISSYDELESIHMAPYLDCLYKGVSTVMASYSSWNGCKLHAHHFLLTEILKGKLGFKGFL ISDWKALDRLSEPRGSNYRRCVYTAINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 615 Download |
MNQVEETMSY VYKNPNAPIE DRIKDLVSRM TLQEKVGQMT QIELCVATLD DVRNLSIGSM 60 VSGGGKEPLE KAMASDWAET IDRFQQAAVD SRLGIPLAYG IDAVHGNNRF YGATIFPHNI 120 GLGATGDADL AQRIGAAVAL EVRASGIHFN FAPCVAVCRD PRWGRCYESF SEDTNIVRKM 180 TSIITGLQGQ PPVGHSKGYP FVAGRYNVIA CAKHFVGDGG TEKGINEGNT ISSYDELESI 240 HMAPYLDCLY KGVSTVMASY SSWNGCKLHA HHFLLTEILK GKLGFKGFLI SDWKALDRLS 300 EPRGSNYRRC VYTAINAGID MVMVPYRYKQ FIEDLISLVE SGEIQMTRID DAVERILRVK 360 FVAGLFEYPF SDRSLLDTIG CKLHRELARE AVRKSLVLLK NGKNPGKPFL PLEKNAERVL 420 IAGTHANNLG YQCGGWTRYW QGSSGRITTG TTILDAFREV MGEKTEVIYE KYPSPNTLSG 480 QNFSFAIVGV GEEPYAESAG DNSELVIPLN GSELISTIAD RIPTLVILIS GRPLVIEPWL 540 LEKMDALVAA WLPGTEGRGI TDVVFGDYEF EGRLPMTWFR TTEELPINKG DNSCDPLFPL 600 GFGLTYKKEN LQSK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-38 | 9 | 608 | 656 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-44 | 396 | 606 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 7.0e-84 | 31 | 359 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 5.0e-84 | 14 | 606 | 669 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 3.0e-86 | 30 | 437 | 415 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 8 | 609 | 1 | 635 | hypothetical protein [Vitis vinifera] |
EMBL | CBI16000.1 | 0 | 30 | 609 | 1 | 582 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279757.1 | 0 | 6 | 609 | 111 | 716 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 6 | 610 | 2 | 600 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 11 | 605 | 5 | 599 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 11 | 605 | 4 | 598 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1x38_A | 0 | 11 | 605 | 4 | 598 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1lq2_A | 0 | 11 | 605 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 11 | 605 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 11 | 605 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 359 | 138 | 493 | 0 |
FC882555 | 289 | 139 | 427 | 0 |
HO784016 | 428 | 58 | 484 | 0 |
EL455042 | 313 | 65 | 377 | 0 |
HO784016 | 48 | 12 | 59 | 0.00003 |
Sequence Alignments (This image is cropped. Click for full image.) |
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