Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G098600.1 |
Family | GT47 |
Protein Properties | Length: 728 Molecular Weight: 85245.4 Isoelectric Point: 6.533 |
Chromosome | Chromosome/Scaffold: 09 Start: 7140017 End: 7142502 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 320 | 604 | 0 |
SCSGRYIYIHNLPRKFNQDLLENCRSLSFWTDMCECASNLGLGARLSNDEKLYSNSGWFATNQFLLEVIFHNRMKQYKCLTKDPLVASAIYVPYYAGLDV GRYLWDPDGFMRDYDALNLVKWLASRPEWKRMWGRDHFLVAGRINWDFRRDPKNESDWGNELLNFDESRNMTMLVLESSPWNYNDFAIPYPTYFHPSRDD AVFQWQNKMRRLKRRFLFSFAGARRPGRHESIRNELIEQCLASRRRCRFLECDKTQKCHKPANVMRLFQNSIFCLQPPGDSYTRR |
Full Sequence |
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Protein Sequence Length: 728 Download |
MEKPMSGKFR CRTQSWYIVL VSFLLWLTLY MCYLYSSSVT FRKRGHSFVA NNHTGFLDSS 60 QSFHVVVRDD ETQDPSHVED IDIVDNVVDD DETETDEDKT TEFSDVEEVN QVIDSMLSED 120 QNGTDTDSAK DNEDVTSNEE VKNMDEDDKP VVQSSAQDKR KEGRSTKQRK GTTANVSERQ 180 RDKKSEEDQE RRKEDRVVKQ KETANVLERQ RGENVEDQAA KRKGAANFLE RQRGENVEDQ 240 TAKRQENADV SERQREDNPE DQPVENMLPA VKSRTERPQR PRRRERNKPA DSLNPVMEKR 300 IEKVVAEPRR QNPVQAGLDS CSGRYIYIHN LPRKFNQDLL ENCRSLSFWT DMCECASNLG 360 LGARLSNDEK LYSNSGWFAT NQFLLEVIFH NRMKQYKCLT KDPLVASAIY VPYYAGLDVG 420 RYLWDPDGFM RDYDALNLVK WLASRPEWKR MWGRDHFLVA GRINWDFRRD PKNESDWGNE 480 LLNFDESRNM TMLVLESSPW NYNDFAIPYP TYFHPSRDDA VFQWQNKMRR LKRRFLFSFA 540 GARRPGRHES IRNELIEQCL ASRRRCRFLE CDKTQKCHKP ANVMRLFQNS IFCLQPPGDS 600 YTRRDYNKYS VMIPESDVKT GKANIERILT RVSRDRRVAM KDEIIKMIPK VIYADPSSRL 660 GEIEDAFDLT VKGILDRVET VRNQMNEGRI VNYDFEEEES WKYFAIGKLG PHEWDAYFSR 720 KIGKHGP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00121 | PTZ00121 | 0.006 | 119 | 271 | 156 | + MAEBL; Provisional | ||
PRK10811 | rne | 0.001 | 142 | 267 | 141 | + ribonuclease E; Reviewed | ||
pfam03016 | Exostosin | 1.0e-56 | 320 | 632 | 352 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 234 | 724 | 49 | 594 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
EMBL | CAN64889.1 | 0 | 7 | 701 | 14 | 710 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_180468.1 | 0 | 119 | 720 | 94 | 719 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002280815.1 | 0 | 319 | 720 | 91 | 523 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313430.1 | 0 | 242 | 720 | 56 | 569 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |