y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G140800.1 |
Family | GH35 |
Protein Properties | Length: 846 Molecular Weight: 93658.7 Isoelectric Point: 8.3038 |
Chromosome | Chromosome/Scaffold: 09 Start: 10653886 End: 10660641 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 342 | 0 |
TINGQRRILISGSIHYPRSSPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPAPGMYNFEGNYDLVKFIKLVKQAGLYVHLRIGPYVCAEWNFGGFPVWLKY IPGINFRTNNRPFKAQMQRFTEKIVGMMKAERLFESQGGPIILSQIENEYGPMEYELGAPGKAYSDWAAKMAVGLGTGVPWVMCKQDDAPDPIINTCNGF YCDYFSPNKAYKPKMWTEAWTGWYTEFGGAVPYRPAEDMAFAVARFIQKGGAFINYYMYQGGTNFGRTAGGPFIATSYDYDAPLDEYGLKRQPKWGHLKD LHR |
Full Sequence |
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Protein Sequence Length: 846 Download |
MAINSNFKLP IMWNAFLVAL LASWVCSVTA SVSYDRKAIT INGQRRILIS GSIHYPRSSP 60 EMWPDLIQKA KEGGLDVIQT YVFWNGHEPA PGMYNFEGNY DLVKFIKLVK QAGLYVHLRI 120 GPYVCAEWNF GGFPVWLKYI PGINFRTNNR PFKAQMQRFT EKIVGMMKAE RLFESQGGPI 180 ILSQIENEYG PMEYELGAPG KAYSDWAAKM AVGLGTGVPW VMCKQDDAPD PIINTCNGFY 240 CDYFSPNKAY KPKMWTEAWT GWYTEFGGAV PYRPAEDMAF AVARFIQKGG AFINYYMYQG 300 GTNFGRTAGG PFIATSYDYD APLDEYGLKR QPKWGHLKDL HRAIKLCEPA LVNGDPTVIQ 360 LGNYEEAHVF NYKTGGCAAF LANYNPNSYA KVAFRNMHYN LPPWSISILP DCKNTVYNTA 420 RVGAQISRKK MVPVPMHGGF SWQACNDETA SDVDSTFTMV GLLEQINTTR DATDYLWYTT 480 NVKIDPREGF LKNGKSPVLT IFSAGHALHV FVNGQLSGSS YGSLEFPKLT FNQGVNLRAG 540 VNTISLLSIA VGLPNVGPHF ETWNAGILGP VTLNGLNEGR RDLSWQKWSY KIGLKGEALS 600 LHSLSGSSSV EWAKGSLVAQ RQPLTWYKTT FNAPAGNAPL ALDMNSMGKG QIWINGQSIG 660 RHWPAYKASG NCGACNYAGT FRENKCGTNC GEASQRWYHV PRSWLNPTGN LLVVFEESGG 720 DPNGISLVRR ETDSVCADIY EWQPTLMNYE MQASGKVNKP LRPKVHLECD AGQKISAVKF 780 ASFGTPEGVC GSYREGSCHA HHSYDAFNRL CLGQNFCTVT VAPEMFGGDP CPSVMKKLSV 840 EVICS* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-7 | 54 | 190 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 2.0e-20 | 767 | 844 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 7.0e-25 | 32 | 334 | 370 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 8.0e-160 | 38 | 344 | 323 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 17 | 845 | 830 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 25 | 845 | 26 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ABV32545.1 | 0 | 11 | 845 | 6 | 841 | beta-galactosidase protein 2 [Prunus persica] |
EMBL | CAC44500.1 | 0 | 11 | 845 | 6 | 843 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | XP_002327432.1 | 0 | 25 | 845 | 19 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 20 | 845 | 20 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 5.04467e-44 | 36 | 340 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-40 | 31 | 327 | 10 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-40 | 31 | 327 | 10 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |