Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G140800.2 |
Family | GH35 |
Protein Properties | Length: 807 Molecular Weight: 89449 Isoelectric Point: 8.1582 |
Chromosome | Chromosome/Scaffold: 09 Start: 10654572 End: 10660596 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 22 | 303 | 0 |
QMWPDLIQKAKEGGLDVIQTYVFWNGHEPAPGMYNFEGNYDLVKFIKLVKQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGINFRTNNRPFKAQMQRFT EKIVGMMKAERLFESQGGPIILSQIENEYGPMEYELGAPGKAYSDWAAKMAVGLGTGVPWVMCKQDDAPDPIINTCNGFYCDYFSPNKAYKPKMWTEAWT GWYTEFGGAVPYRPAEDMAFAVARFIQKGGAFINYYMYQGGTNFGRTAGGPFIATSYDYDAPLDEYGLKRQPKWGHLKDLHR |
Full Sequence |
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Protein Sequence Length: 807 Download |
MFKFSASCLV VKNIWVFLVL LQMWPDLIQK AKEGGLDVIQ TYVFWNGHEP APGMYNFEGN 60 YDLVKFIKLV KQAGLYVHLR IGPYVCAEWN FGGFPVWLKY IPGINFRTNN RPFKAQMQRF 120 TEKIVGMMKA ERLFESQGGP IILSQIENEY GPMEYELGAP GKAYSDWAAK MAVGLGTGVP 180 WVMCKQDDAP DPIINTCNGF YCDYFSPNKA YKPKMWTEAW TGWYTEFGGA VPYRPAEDMA 240 FAVARFIQKG GAFINYYMYQ GGTNFGRTAG GPFIATSYDY DAPLDEYGLK RQPKWGHLKD 300 LHRAIKLCEP ALVNGDPTVI QLGNYEEAHV FNYKTGGCAA FLANYNPNSY AKVAFRNMHY 360 NLPPWSISIL PDCKNTVYNT ARVGAQISRK KMVPVPMHGG FSWQACNDET ASDVDSTFTM 420 VGLLEQINTT RDATDYLWYT TNVKIDPREG FLKNGKSPVL TIFSAGHALH VFVNGQLSGS 480 SYGSLEFPKL TFNQGVNLRA GVNTISLLSI AVGLPNVGPH FETWNAGILG PVTLNGLNEG 540 RRDLSWQKWS YKIGLKGEAL SLHSLSGSSS VEWAKGSLVA QRQPLTWYKT TFNAPAGNAP 600 LALDMNSMGK GQIWINGQSI GRHWPAYKAS GNCGACNYAG TFRENKCGTN CGEASQRWYH 660 VPRSWLNPTG NLLVVFEESG GDPNGISLVR RETDSVCADI YEWQPTLMNY EMQASGKVNK 720 PLRPKVHLEC DAGQKISAVK FASFGTPEGV CGSYREGSCH AHHSYDAFNR LCLGQNFCTV 780 TVAPEMFGGD PCPSVMKKLS VEVICS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 4.0e-7 | 24 | 151 | 142 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 8.0e-19 | 23 | 295 | 340 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-20 | 728 | 805 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 3.0e-144 | 22 | 305 | 300 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 22 | 806 | 786 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 22 | 806 | 62 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ABV32545.1 | 0 | 22 | 806 | 57 | 841 | beta-galactosidase protein 2 [Prunus persica] |
EMBL | CAC44500.1 | 0 | 22 | 806 | 59 | 843 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | XP_002327432.1 | 0 | 22 | 806 | 55 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 22 | 806 | 61 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 4e-38 | 22 | 301 | 37 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 7e-34 | 24 | 288 | 42 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 7e-34 | 24 | 288 | 42 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |