Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G147800.1 |
Family | CE8 |
Protein Properties | Length: 588 Molecular Weight: 64642.1 Isoelectric Point: 8.1795 |
Chromosome | Chromosome/Scaffold: 09 Start: 11222950 End: 11225711 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 280 | 572 | 0 |
NVIVAKDGSGHFKTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHKWNVMIYGDGKTKTTISGSRNFVDGTATFDTATFTVAGRGFIAKDIKFENTA GAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTIT PFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTIFYAEYQNTGPGSTVDQRVKWAGYRSSLTEADAGKFTVANFIQG |
Full Sequence |
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Protein Sequence Length: 588 Download |
MDSIKSFKGY GKVDEAEERA FKRKTRRRLI ILVISIIVLL AVIIGAVAGT LIHKRNNSSP 60 DTASPTELTP AASLKAVCEV TQYPSSCFSS ISSIASSNAN DPKILFKLSL KVAIDELSGL 120 SQYPKKLQAE TNNSQVKHAL DVCGTVFDDA LDRLNDSATS LEVGEGESLL SDSKIDDLKT 180 WLSTVITDQE TCLDALEELN TTKNFNATLF EELKAAMQNS SEYASNSLAI AAKFLGLLTN 240 FRIPIHRRLL GFQKAAPSEF PAWVSPTERR LLQESKPTPN VIVAKDGSGH FKTINEAVQL 300 VGKKNQSRFV IYVKEGKYVE NVNLDKHKWN VMIYGDGKTK TTISGSRNFV DGTATFDTAT 360 FTVAGRGFIA KDIKFENTAG AAKHQAVAMR SGSDRSVFYS CAFDAYQDTL YAHSNRQFYR 420 ECDILGTIDF IFGNAAVVFQ NCNIQPRQPL PNQFNTITAQ GKKDPNQNTG ISIQKCTITP 480 FGNLTANTYL GRPWKEFSTT VIMQSNIGAF LNPVGWREWV TNVDPPSTIF YAEYQNTGPG 540 STVDQRVKWA GYRSSLTEAD AGKFTVANFI QGQDWLPAAT VAYEPAF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 2.0e-145 | 56 | 579 | 545 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 8.0e-147 | 70 | 583 | 528 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 8.0e-176 | 280 | 572 | 298 | + Pectinesterase. | ||
PLN02314 | PLN02314 | 0 | 1 | 584 | 584 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 7 | 587 | 594 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_175787.1 | 0 | 1 | 581 | 1 | 581 | ATPME1; pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q43111 | 0 | 1 | 584 | 1 | 578 | PME3_PHAVU RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265217.1 | 0 | 1 | 587 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 1 | 584 | 1 | 585 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532945.1 | 0 | 1 | 587 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 273 | 584 | 1 | 316 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 280 | 583 | 4 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-18 | 278 | 577 | 3 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-18 | 278 | 577 | 3 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-18 | 278 | 577 | 3 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |