Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G154800.1 |
Family | GH17 |
Protein Properties | Length: 393 Molecular Weight: 43241.5 Isoelectric Point: 6.3619 |
Chromosome | Chromosome/Scaffold: 09 Start: 11870380 End: 11872492 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 24 | 340 | 0 |
LGINYGQVGNNLPPPDKVLDLLTALKLKKARIYDTNPQVLTTFANSNIELIVTVENQMLPVVMDPQQALQWVSTHIKPYFPATKITGIAVGNEIFTDDDT SLLGYLVPAIVSIHGALVQLGLDKYIQVSTPNSLAVLEVSYPPSAGSFKGEVSGVMSQFLQFLSSTGSPFWINAYPYFAYKDSPNKISLDYALFNKNPGM VDPYTKLHYDNMLYAQVDAVVYAMSRLGYGGIEVRVSETGWPSKGDSNEVGATVQNAAVYNRNLLRRQMSNEGTPLRPNMRLEVYLFALFNEDMKPGPTS ERNYGLFQPDGTMAYNV |
Full Sequence |
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Protein Sequence Length: 393 Download |
MIHVFLLFSL CFSDYGLILG VTSLGINYGQ VGNNLPPPDK VLDLLTALKL KKARIYDTNP 60 QVLTTFANSN IELIVTVENQ MLPVVMDPQQ ALQWVSTHIK PYFPATKITG IAVGNEIFTD 120 DDTSLLGYLV PAIVSIHGAL VQLGLDKYIQ VSTPNSLAVL EVSYPPSAGS FKGEVSGVMS 180 QFLQFLSSTG SPFWINAYPY FAYKDSPNKI SLDYALFNKN PGMVDPYTKL HYDNMLYAQV 240 DAVVYAMSRL GYGGIEVRVS ETGWPSKGDS NEVGATVQNA AVYNRNLLRR QMSNEGTPLR 300 PNMRLEVYLF ALFNEDMKPG PTSERNYGLF QPDGTMAYNV GLSALATSSS TSSASISLTS 360 SATKASKVEY QSLVYCMFLY LLTFQGFMRR QH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-5 | 253 | 319 | 68 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-93 | 24 | 340 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM96962.1 | 0 | 4 | 392 | 15 | 408 | putative beta-1,3-glucanase precursor [Arabidopsis thaliana] |
RefSeq | XP_002270153.1 | 0 | 1 | 341 | 11 | 351 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306003.1 | 0 | 21 | 342 | 1 | 322 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332000.1 | 0 | 1 | 364 | 10 | 373 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519678.1 | 0 | 1 | 341 | 1 | 340 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 24 | 340 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 24 | 343 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 24 | 343 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 24 | 343 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 24 | 343 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |