y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G155100.3 |
Family | GH47 |
Protein Properties | Length: 557 Molecular Weight: 61994.2 Isoelectric Point: 7.1318 |
Chromosome | Chromosome/Scaffold: 09 Start: 11889885 End: 11895284 |
Description | alpha-mannosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 144 | 552 | 0 |
AFTHAWSGYKKFAMGYDELMPVSRLGVDGLGGLGATVVDALDTAMIMGLDEVVSEAGSWIESHLLDRIRQKGQVNLFETTIRVLGGLLSAYHLSGGEQGM TLAQKGPKPTIYLDIAKNLADRLLSAFTSSPTAIPFSDVVLRDSSAHSAPDGLSSTSEVSTLQLEFNYLSAISGDPKYRTEGMKVLAHLKTLPKTEGLVP IYISPHSGEFSGENIRLGSRGDSYYEYLIKVWLQLRDTQDGNFTYLHDMYEEAMRGVKHMLVQKSIPSELVFVGELPVGPKGYLSPKMDHLVCFLPGTLA LGATKGLTKEKAMKDNLLTFEDLENLKLAEDLTKTCFEMYSVTSTGLAPEIAYFRTKDYFESGLDGGNKSSEYVNDIIIKHADRHNLLRPETVESLFVLY RITQDPKYA |
Full Sequence |
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Protein Sequence Length: 557 Download |
MSKSLPYSMK DVHYDNAKFR HRSLFKVITQ TLLTSNMRRE CLSCSTGKFL GLLMIFGLAC 60 LMLTHTNKAH SVSDGLAKGI GTNEEHEEVT DVGIRFKKLF RRAPRLPPRL SPDEKIIHRN 120 FTGKLNEPNV EEQWKARQQN VKDAFTHAWS GYKKFAMGYD ELMPVSRLGV DGLGGLGATV 180 VDALDTAMIM GLDEVVSEAG SWIESHLLDR IRQKGQVNLF ETTIRVLGGL LSAYHLSGGE 240 QGMTLAQKGP KPTIYLDIAK NLADRLLSAF TSSPTAIPFS DVVLRDSSAH SAPDGLSSTS 300 EVSTLQLEFN YLSAISGDPK YRTEGMKVLA HLKTLPKTEG LVPIYISPHS GEFSGENIRL 360 GSRGDSYYEY LIKVWLQLRD TQDGNFTYLH DMYEEAMRGV KHMLVQKSIP SELVFVGELP 420 VGPKGYLSPK MDHLVCFLPG TLALGATKGL TKEKAMKDNL LTFEDLENLK LAEDLTKTCF 480 EMYSVTSTGL APEIAYFRTK DYFESGLDGG NKSSEYVNDI IIKHADRHNL LRPETVESLF 540 VLYRITQDPK YALLVL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1331 | COG1331 | 0.007 | 192 | 333 | 153 | + Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] | ||
PTZ00470 | PTZ00470 | 9.0e-124 | 131 | 551 | 424 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 1.0e-153 | 144 | 551 | 411 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52061.1 | 0 | 129 | 551 | 57 | 480 | AC022455_15 endoplasmic reticulum alpha-mannosidase, putative; 33510-31408 [Arabidopsis thaliana] |
RefSeq | NP_564345.1 | 0 | 1 | 551 | 1 | 543 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002275664.1 | 0 | 1 | 551 | 1 | 555 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
RefSeq | XP_002306001.1 | 0 | 1 | 551 | 1 | 551 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519694.1 | 0 | 1 | 551 | 1 | 542 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fmi_A | 0 | 137 | 551 | 10 | 377 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 137 | 551 | 10 | 377 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 137 | 551 | 10 | 377 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 137 | 551 | 88 | 455 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1dl2_A | 0 | 138 | 551 | 6 | 414 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES806438 | 359 | 196 | 549 | 0 |
CO076473 | 274 | 278 | 551 | 0 |
EX266875 | 313 | 239 | 551 | 0 |
DT336345 | 317 | 181 | 497 | 0 |
EC919849 | 293 | 113 | 405 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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