Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.009G155100.4 |
Family | GH47 |
Protein Properties | Length: 476 Molecular Weight: 52784.2 Isoelectric Point: 5.0528 |
Chromosome | Chromosome/Scaffold: 09 Start: 11889885 End: 11895284 |
Description | alpha-mannosidase 3 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH47 | 1 | 472 | 0 |
MGYDELMPVSRLGVDGLGGLGATVVDALDTAMIMGLDEVVSEAGSWIESHLLDRIRQKGQVNLFETTIRVLGGLLSAYHLSGGEQGMTLAQKGPKPTIYL DIAKNLADRLLSAFTSSPTAIPFSDVVLRDSSAHSAPDGLSSTSEVSTLQLEFNYLSAISGDPKYRTEGMKVLAHLKTLPKTEGLVPIYISPHSGEFSGE NIRLGSRGDSYYEYLIKVWLQLRDTQDGNFTYLHDMYEEAMRGVKHMLVQKSIPSELVFVGELPVGPKGYLSPKMDHLVCFLPGTLALGATKGLTKEKAM KDNLLTFEDLENLKLAEDLTKTCFEMYSVTSTGLAPEIAYFRTKDYFESGLDGGNKSSEYVNDIIIKHADRHNLLRPETVESLFVLYRITQDPKYREWGW HIFESFEKYTKVESGGYSSLDDVTTVPPPKRDKMETFFLGETLKYLYLLFGDSSVIPLDKFAFNTEAHPLPI |
Full Sequence |
---|
Protein Sequence Length: 476 Download |
MGYDELMPVS RLGVDGLGGL GATVVDALDT AMIMGLDEVV SEAGSWIESH LLDRIRQKGQ 60 VNLFETTIRV LGGLLSAYHL SGGEQGMTLA QKGPKPTIYL DIAKNLADRL LSAFTSSPTA 120 IPFSDVVLRD SSAHSAPDGL SSTSEVSTLQ LEFNYLSAIS GDPKYRTEGM KVLAHLKTLP 180 KTEGLVPIYI SPHSGEFSGE NIRLGSRGDS YYEYLIKVWL QLRDTQDGNF TYLHDMYEEA 240 MRGVKHMLVQ KSIPSELVFV GELPVGPKGY LSPKMDHLVC FLPGTLALGA TKGLTKEKAM 300 KDNLLTFEDL ENLKLAEDLT KTCFEMYSVT STGLAPEIAY FRTKDYFESG LDGGNKSSEY 360 VNDIIIKHAD RHNLLRPETV ESLFVLYRIT QDPKYREWGW HIFESFEKYT KVESGGYSSL 420 DDVTTVPPPK RDKMETFFLG ETLKYLYLLF GDSSVIPLDK FAFNTEAHPL PIKSS* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1331 | COG1331 | 0.009 | 36 | 177 | 153 | + Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] | ||
PTZ00470 | PTZ00470 | 2.0e-160 | 1 | 472 | 475 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 0 | 1 | 472 | 475 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52061.1 | 0 | 1 | 475 | 85 | 560 | AC022455_15 endoplasmic reticulum alpha-mannosidase, putative; 33510-31408 [Arabidopsis thaliana] |
RefSeq | NP_564345.1 | 0 | 1 | 475 | 148 | 623 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002275664.1 | 0 | 1 | 473 | 161 | 633 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
RefSeq | XP_002306001.1 | 0 | 1 | 475 | 157 | 631 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519694.1 | 0 | 1 | 475 | 148 | 622 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fmi_A | 0 | 2 | 472 | 31 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 2 | 472 | 31 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 2 | 472 | 31 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 2 | 472 | 109 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1dl2_A | 0 | 2 | 472 | 26 | 494 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
CO076473 | 285 | 122 | 406 | 0 |
ES806438 | 359 | 40 | 393 | 0 |
JG451037 | 274 | 190 | 463 | 0 |
EX266875 | 361 | 83 | 440 | 0 |
GO845862 | 338 | 116 | 453 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|