y
Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.009G166800.1 |
Family | GT35 |
Protein Properties | Length: 1000 Molecular Weight: 113618 Isoelectric Point: 6.5492 |
Chromosome | Chromosome/Scaffold: 09 Start: 12834689 End: 12843255 |
Description | alpha-glucan phosphorylase 2 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT35 | 281 | 993 | 0 |
ALSQLGFDFEVLAEQEGDACLGNGGLARLSACQMDSLATLDYPAVGYGLRYQYGLFRQVIVDGFQHEQPDYWLNFGNPWEIERVHITYPVKFYGTVTDEF LNGEKCKVWVPGEMVEAVAYDNPIPGYGTRNTINLRLWAAKPSDQNDMESFNTGDYVDAVVNRQRAESISSILYPDDRSYQGKELRLKQQYFFVSASVQD IFRRFKDTHKKFDEFPEKVALQLNDTHPSLAIAEVMRVLLDEEHLSWHRAWDIICKIFSFTTHTVSPEGLEKIPVDLLGNLLPRHLQIIYDINFNFVEEL KKMIGLDYDRLTRMSIVEEGAVKNIRMANLSVICSHTVNGVSRLHSELLRTKLFKDFYDLWPHKFQYKTNGVTQRRWIVVSNPSLCALISKWLGTEAWIR DIDLLIGLRDYATNAELHQEWKMVKKVNKIRLAEYIEAMSGLKVSLDAMFDVQTKRIHEYKRQLLNILGIIHRYDCIKNMDKNDRKKVVPRVCIIGGKAA PGYEIAKKIIKLCHVVAERINNDKDIGDLLKLVFIPDYNVSVAEMVIPGADLSQHLSTAGHEASGTGSMKFLMNGCLLLATADGSTIEMVEEIGQDNMFL FGAKAHEVVALRKKGPTLKVPLQFSRVVRMIRDGHFGFEDYFKSLCDKIEGTSDYFLLGADFMSYLEAQAAADKAFVDEERWTKMSILSAAGSGRFSSDR TIQEYAENTWDIQ |
Full Sequence |
---|
Protein Sequence Length: 1000 Download |
MATLSFSPLK PNTLFSSFLF PSKNLSSRPI IYTLPHRNTP PLTFSAAKRP PATSATNSSS 60 SVTVETVSPE NDANSTVFVI RARNRTGLLQ VITRVFNILG LSVEKATVDF EEDYFVMTFF 120 VTDSRGNKID DQKSLESINK ALIDAIDGDD DAALSVAPPD RGVVVRKPRL DFGERKGQAE 180 RMLGLMDVFL KNDPISLQKD ILHHVEYTVA RSRFSFDDFE AYQALAHSVR DRLIERWHDT 240 LIHFKKEDPK RVYFLSLEFL MGRSLSNIVI NLGIRDQFAD ALSQLGFDFE VLAEQEGDAC 300 LGNGGLARLS ACQMDSLATL DYPAVGYGLR YQYGLFRQVI VDGFQHEQPD YWLNFGNPWE 360 IERVHITYPV KFYGTVTDEF LNGEKCKVWV PGEMVEAVAY DNPIPGYGTR NTINLRLWAA 420 KPSDQNDMES FNTGDYVDAV VNRQRAESIS SILYPDDRSY QGKELRLKQQ YFFVSASVQD 480 IFRRFKDTHK KFDEFPEKVA LQLNDTHPSL AIAEVMRVLL DEEHLSWHRA WDIICKIFSF 540 TTHTVSPEGL EKIPVDLLGN LLPRHLQIIY DINFNFVEEL KKMIGLDYDR LTRMSIVEEG 600 AVKNIRMANL SVICSHTVNG VSRLHSELLR TKLFKDFYDL WPHKFQYKTN GVTQRRWIVV 660 SNPSLCALIS KWLGTEAWIR DIDLLIGLRD YATNAELHQE WKMVKKVNKI RLAEYIEAMS 720 GLKVSLDAMF DVQTKRIHEY KRQLLNILGI IHRYDCIKNM DKNDRKKVVP RVCIIGGKAA 780 PGYEIAKKII KLCHVVAERI NNDKDIGDLL KLVFIPDYNV SVAEMVIPGA DLSQHLSTAG 840 HEASGTGSMK FLMNGCLLLA TADGSTIEMV EEIGQDNMFL FGAKAHEVVA LRKKGPTLKV 900 PLQFSRVVRM IRDGHFGFED YFKSLCDKIE GTSDYFLLGA DFMSYLEAQA AADKAFVDEE 960 RWTKMSILSA AGSGRFSSDR TIQEYAENTW DIQPCRCPF* 1020 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 198 | 992 | 807 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 201 | 992 | 804 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 281 | 994 | 720 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
PRK14986 | PRK14986 | 0 | 196 | 996 | 810 | + glycogen phosphorylase; Provisional | ||
COG0058 | GlgP | 0 | 196 | 994 | 812 | + Glucan phosphorylase [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30609.1 | 0 | 186 | 998 | 1 | 813 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001757919.1 | 0 | 186 | 995 | 1 | 810 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002273615.1 | 0 | 182 | 998 | 1 | 817 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305114.1 | 0 | 182 | 999 | 1 | 818 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509431.1 | 0 | 2 | 999 | 11 | 949 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ygp_B | 0 | 192 | 995 | 39 | 878 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1ygp_A | 0 | 192 | 995 | 39 | 878 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 3l7d_A | 0 | 196 | 996 | 27 | 832 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 3l7c_A | 0 | 196 | 996 | 27 | 832 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 3l7b_A | 0 | 196 | 996 | 27 | 832 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO779924 | 616 | 96 | 706 | 0 |
HO586252 | 541 | 457 | 995 | 0 |
CO095011 | 285 | 413 | 697 | 0 |
HO376977 | 448 | 554 | 1000 | 0 |
HO779924 | 23 | 73 | 95 | 1.3 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|