| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G239600.1 |
| Family | GH5 |
| Protein Properties | Length: 507 Molecular Weight: 56635 Isoelectric Point: 6.7283 |
| Chromosome | Chromosome/Scaffold: 09 Start: 19102982 End: 19106244 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 213 | 494 | 1.09301e-43 |
| ENAPQVMREHWRTFIVEKDFKFISQNGLNAVRIPVGWWIASDPTPPPPFVGGSLQALDNAFQWAKKYGLKVIIDLHAAPGSQNGWEHSGSRDSSQEWGKT DETITQTVAVIDFLASRYANSPSLYAVELINEPLSPGATLSSVIEYYKAGYAAVRRHTSTAFVVMSNRLGPMKPRELFPIASGFKRSVIDVHYYNLFEDM FNNMTVQQNIDFVYNNRSSQLNYVTTSNGPLTFVGEWVAEWQVVGAGKEDYQRLAEAQMEVYGRASFGWAYWTLKNVNKHWS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 507 Download |
| MLVSSTMHLL SMCVLSLVLS CCQGREDPNF RIRAVNLGGW LVTEGWIKPS LFDGIVNKDF 60 LDGTALQFKS VTTGKYLSAE QGGGSIIVAN RTTASGWETF RLWRINETAF NFRVFGKQFI 120 GVDTDGNGIG IVAISKAPGH SETFEILRNS DDKNRVRIKA SNGYYLQAKT EEVVTADSQG 180 NKGWGDDDPS VFVMKMTGRL EGEFQVTNGY GPENAPQVMR EHWRTFIVEK DFKFISQNGL 240 NAVRIPVGWW IASDPTPPPP FVGGSLQALD NAFQWAKKYG LKVIIDLHAA PGSQNGWEHS 300 GSRDSSQEWG KTDETITQTV AVIDFLASRY ANSPSLYAVE LINEPLSPGA TLSSVIEYYK 360 AGYAAVRRHT STAFVVMSNR LGPMKPRELF PIASGFKRSV IDVHYYNLFE DMFNNMTVQQ 420 NIDFVYNNRS SQLNYVTTSN GPLTFVGEWV AEWQVVGAGK EDYQRLAEAQ MEVYGRASFG 480 WAYWTLKNVN KHWSLEWMIN NGYIKL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 2.0e-8 | 68 | 178 | 111 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 2.0e-13 | 222 | 488 | 276 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 6.0e-30 | 222 | 503 | 323 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18831.1 | 0 | 27 | 506 | 30 | 505 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001064458.1 | 0 | 25 | 506 | 31 | 508 | Os10g0370500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002285806.1 | 0 | 1 | 506 | 1 | 508 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002464704.1 | 0 | 28 | 506 | 39 | 514 | hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor] |
| RefSeq | XP_002513884.1 | 0 | 1 | 506 | 1 | 506 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 2e-34 | 203 | 502 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 2pc8_A | 3e-34 | 203 | 502 | 51 | 382 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
| PDB | 2pbo_A | 3e-34 | 203 | 502 | 51 | 382 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
