| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G254800.2 |
| Family | GT1 |
| Protein Properties | Length: 653 Molecular Weight: 72500.5 Isoelectric Point: 5.7559 |
| Chromosome | Chromosome/Scaffold: 09 Start: 20942637 End: 20950985 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 202 | 611 | 0 |
| VGTRGDVQPFLAMAKRLQEFGHRVRLATHANFRNFVKLADIDFYPLGGDPRVLAGYMARNKGLIPSGPGEISIQRKQLKSIIESLLPACTEPDIETGMPF RAQAIIANPPAYGHSHVAEALGVPLHIFFTMPWTPTSEFPHPLARVPQSAGYWLSYIVVDLLIWWGIRGYINDFRKKKLKLAPIAYFSTYNGSISHLPTG YMWSSHLVPKPKDWGPLVDVVGYCFLNLGSKYRPREEFVQWIQKGPQPIYIGFGSMPLDDTKKTTDVILEALKDTGQRGIIDRGWGDLGQFTEATENVFL IEDCPHDWLFPQCSAVVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRVHQRGLGPAPIPISELSIEKLSNAITFMLQPEVKSLAMELAKLIENEDGV AAAVNAFHRH | |||
| Full Sequence |
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| Protein Sequence Length: 653 Download |
| MGSNGIECSR KDLQEESVSN NRSKGVLKDS EQTDEVDESA MEYRSSDDQS FSSCYEKEEN 60 QKSSSEQKSS VIEVSETKQS SVSSTPKRGL DHCTSAPLAA QGNQLIDDNE IAFSRSMTEK 120 KNSRHDLKID RLSEREKKNL IVNLIKIQND GTVEVDLPKN SPVASELLEL SSIEGPSFDL 180 DDTLFYETTK SIPRLNIAIL VVGTRGDVQP FLAMAKRLQE FGHRVRLATH ANFRNFVKLA 240 DIDFYPLGGD PRVLAGYMAR NKGLIPSGPG EISIQRKQLK SIIESLLPAC TEPDIETGMP 300 FRAQAIIANP PAYGHSHVAE ALGVPLHIFF TMPWTPTSEF PHPLARVPQS AGYWLSYIVV 360 DLLIWWGIRG YINDFRKKKL KLAPIAYFST YNGSISHLPT GYMWSSHLVP KPKDWGPLVD 420 VVGYCFLNLG SKYRPREEFV QWIQKGPQPI YIGFGSMPLD DTKKTTDVIL EALKDTGQRG 480 IIDRGWGDLG QFTEATENVF LIEDCPHDWL FPQCSAVVHH GGAGTTATGL KAGCPTTIVP 540 FFGDQFFWGD RVHQRGLGPA PIPISELSIE KLSNAITFML QPEVKSLAME LAKLIENEDG 600 VAAAVNAFHR HLPPELPLPT AALEENDRPN PLQWFFLQIG KLCCLPCGLW NS* 660 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01426 | MGT | 7.0e-5 | 206 | 576 | 385 | + glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. | ||
| pfam03033 | Glyco_transf_28 | 2.0e-35 | 197 | 341 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| COG1819 | COG1819 | 2.0e-37 | 197 | 610 | 423 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 3.0e-126 | 196 | 611 | 420 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABC96116.1 | 0 | 29 | 648 | 73 | 700 | sterol glucosyltransferase [Withania somnifera] |
| EMBL | CBI18214.1 | 0 | 2 | 648 | 52 | 697 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265312.1 | 0 | 2 | 648 | 36 | 681 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302172.1 | 0 | 44 | 647 | 11 | 615 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524293.1 | 0 | 90 | 647 | 18 | 577 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 2e-26 | 195 | 604 | 1 | 374 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 3h4i_A | 2e-26 | 195 | 604 | 1 | 374 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1iir_A | 7e-25 | 195 | 613 | 1 | 403 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 1rrv_B | 7e-23 | 195 | 595 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 7e-23 | 195 | 595 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DT547914 | 322 | 213 | 534 | 0 |
| HO801427 | 429 | 224 | 645 | 0 |
| CO103793 | 276 | 208 | 483 | 0 |
| GT172550 | 311 | 169 | 479 | 0 |
| HO801427 | 29 | 195 | 223 | 0.0005 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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