| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G260700.1 |
| Family | AA1 |
| Protein Properties | Length: 296 Molecular Weight: 32410.3 Isoelectric Point: 4.5562 |
| Chromosome | Chromosome/Scaffold: 09 Start: 21492272 End: 21494347 |
| Description | laccase 14 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 26 | 245 | 2.8026e-45 |
| EVLYYEFFLQESQFTKLCSTKSILTVNGSFPGPEIRVRRGDTVFVNVHNQGNHAVSLKWEGVKDSIDGSNELIQPGRNFTYEIELEDEIGTLWWHATSAW AAATVHGAFVILPAANEDYPFPAPTSDQTIILGEWFREELTEANQTIAPGSADAYTINGHPGETYGCSNDTTYEMQVDYEGLYLVRVINAIANETMVFGV ASHSFTIVGQSGAYSRRSFT | |||
| Full Sequence |
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| Protein Sequence Length: 296 Download |
| MGSEKQGFIW LSGLLFLNIL ALSTAEVLYY EFFLQESQFT KLCSTKSILT VNGSFPGPEI 60 RVRRGDTVFV NVHNQGNHAV SLKWEGVKDS IDGSNELIQP GRNFTYEIEL EDEIGTLWWH 120 ATSAWAAATV HGAFVILPAA NEDYPFPAPT SDQTIILGEW FREELTEANQ TIAPGSADAY 180 TINGHPGETY GCSNDTTYEM QVDYEGLYLV RVINAIANET MVFGVASHSF TIVGQSGAYS 240 RRSFTNSLTL APAQVVDVLL CANQNVGHYY ITARPSSGAH ITNGILRYTT TSSLI* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02792 | PLN02792 | 1.0e-23 | 51 | 271 | 234 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 3.0e-24 | 14 | 291 | 300 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 7.0e-25 | 45 | 289 | 270 | + copper ion binding / oxidoreductase | ||
| PLN02991 | PLN02991 | 4.0e-25 | 11 | 293 | 298 | + oxidoreductase | ||
| TIGR03389 | laccase | 9.0e-78 | 25 | 293 | 288 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAR83118.1 | 0 | 1 | 291 | 1 | 310 | secretory laccase [Gossypium arboreum] |
| EMBL | CBI18270.1 | 0 | 15 | 294 | 1 | 300 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263602.1 | 0 | 21 | 294 | 26 | 317 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002325575.1 | 0 | 20 | 273 | 8 | 274 | multicopper oxidase [Populus trichocarpa] |
| RefSeq | XP_002527127.1 | 0 | 7 | 275 | 14 | 291 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pxl_A | 5e-16 | 45 | 288 | 21 | 281 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 3v9c_A | 5e-16 | 45 | 288 | 21 | 281 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 3fpx_A | 5e-16 | 45 | 288 | 21 | 281 | A Chain A, Native Fungus Laccase From Trametes Hirsuta |
| PDB | 1gyc_A | 0.000000000000002 | 46 | 288 | 22 | 281 | A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions |
| PDB | 3div_A | 0.000000000000006 | 45 | 288 | 21 | 281 | A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution |
| Transmembrane Domains | |||||
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| Start | End | ||||
| 7 | 29 | ||||
| Signal Peptide | |||||
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| Cleavage Site | |||||
| 25 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CO083229 | 263 | 1 | 263 | 0 |
| GR930200 | 274 | 1 | 274 | 0 |
| GR928375 | 226 | 1 | 226 | 0 |
| CO108125 | 260 | 1 | 260 | 0 |
| CO108125 | 30 | 259 | 288 | 0.0002 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Gossypium raimondii | Gorai.009G261200.1 | Gorai.009G261600.1 | Gorai.009G261400.1 | Gorai.009G287100.1 | Gorai.009G261200.2 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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