| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G261100.2 |
| Family | AA1 |
| Protein Properties | Length: 415 Molecular Weight: 46570.6 Isoelectric Point: 6.5686 |
| Chromosome | Chromosome/Scaffold: 09 Start: 21546098 End: 21548572 |
| Description | laccase 14 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 25 | 403 | 0 |
| ADVHHYEFFVRESNFTKLCNTTTLLVVNDSYPGPQIRVHRGDTVFVNVHNQGNYGFTIHWHGVKQPRNPWSDGPEFVTQCPIQPGTNFTYEIVLSDEIGT LWWHAHSDWTRGSVHGAFIILPAKKETYPFPTPNADQTVILESWYDGDYKQIIDDALAAGVSPRQPNAYAINGHVGDTYGCPNDTIFRMQVDSEKIYLLR IINAAMNEHFFFTIANHTLTVVAQDASYVRRFTRDYILISPGQTMDVLVSANRNVGQYYMAIRPFSDSSAAPIDNITTGIFQYTNSEGGLNASLITLPVM NDTDAMINFLNQIRNTKVSQNPRINVPADKDIKRRVFIALAVNNLPCSNCVVGTRLVASLNNVSYVSPSIDILQAYYNR | |||
| Full Sequence |
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| Protein Sequence Length: 415 Download |
| MGLQQGFVTW FVGVLFLTTL LLSSADVHHY EFFVRESNFT KLCNTTTLLV VNDSYPGPQI 60 RVHRGDTVFV NVHNQGNYGF TIHWHGVKQP RNPWSDGPEF VTQCPIQPGT NFTYEIVLSD 120 EIGTLWWHAH SDWTRGSVHG AFIILPAKKE TYPFPTPNAD QTVILESWYD GDYKQIIDDA 180 LAAGVSPRQP NAYAINGHVG DTYGCPNDTI FRMQVDSEKI YLLRIINAAM NEHFFFTIAN 240 HTLTVVAQDA SYVRRFTRDY ILISPGQTMD VLVSANRNVG QYYMAIRPFS DSSAAPIDNI 300 TTGIFQYTNS EGGLNASLIT LPVMNDTDAM INFLNQIRNT KVSQNPRINV PADKDIKRRV 360 FIALAVNNLP CSNCVVGTRL VASLNNVSYV SPSIDILQAY YNRYIIYIHG YSNS* 420 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02604 | PLN02604 | 8.0e-35 | 23 | 392 | 393 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 1.0e-36 | 28 | 323 | 301 | + copper ion binding / oxidoreductase | ||
| TIGR03388 | ascorbase | 5.0e-37 | 27 | 392 | 400 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07732 | Cu-oxidase_3 | 1.0e-46 | 34 | 148 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 2.0e-151 | 25 | 404 | 385 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAR83118.1 | 0 | 1 | 403 | 1 | 403 | secretory laccase [Gossypium arboreum] |
| GenBank | ACI46953.1 | 0 | 4 | 401 | 5 | 405 | putative lacasse/diphenol oxidase [Castanea mollissima] |
| RefSeq | XP_002325572.1 | 0 | 20 | 401 | 8 | 390 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002325575.1 | 0 | 20 | 401 | 8 | 390 | multicopper oxidase [Populus trichocarpa] |
| RefSeq | XP_002527127.1 | 0 | 1 | 401 | 1 | 406 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 2e-28 | 25 | 399 | 1 | 379 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1asq_A | 2e-28 | 25 | 399 | 1 | 379 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1asp_B | 2e-28 | 25 | 399 | 1 | 379 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1asp_A | 2e-28 | 25 | 399 | 1 | 379 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1aso_B | 2e-28 | 25 | 399 | 1 | 379 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| Transmembrane Domains | ||||
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| Start | End | |||
| 7 | 29 | |||
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 25 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DT465992 | 269 | 135 | 403 | 0 |
| CO112742 | 243 | 23 | 265 | 0 |
| GR927107 | 255 | 1 | 255 | 0 |
| ES824107 | 311 | 89 | 392 | 0 |
| GR927107 | 26 | 255 | 280 | 0.002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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