| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G261200.1 |
| Family | AA1 |
| Protein Properties | Length: 294 Molecular Weight: 32113.2 Isoelectric Point: 5.8238 |
| Chromosome | Chromosome/Scaffold: 09 Start: 21551474 End: 21554133 |
| Description | laccase 14 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 25 | 277 | 0 |
| ADVHYYEFFLQESQFTKLCSTKSILTVNGSFPGPEIRVRRGDTVFVNVHNQGNHAVSLKWEGVKGSIDGSNELIQPGTNFTYKIELKGEIGTLWWHATSA WAAATVHGAFVISPAANEDYPFPAPTSDQTIILGQWFKQELTEGDKTIAPGRADAYTINGHPGETYGCSNDTTFEMQVDYEGLYLVRVINAVVNETMVFA VASHSFTIVGQNGAYTKRSFTNSLTLAPAQVVDVLLCANVNVGHYYITARPSS | |||
| Full Sequence |
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| Protein Sequence Length: 294 Download |
| MGSEKQGFIW LSGLLFLNIL VLSTADVHYY EFFLQESQFT KLCSTKSILT VNGSFPGPEI 60 RVRRGDTVFV NVHNQGNHAV SLKWEGVKGS IDGSNELIQP GTNFTYKIEL KGEIGTLWWH 120 ATSAWAAATV HGAFVISPAA NEDYPFPAPT SDQTIILGQW FKQELTEGDK TIAPGRADAY 180 TINGHPGETY GCSNDTTFEM QVDYEGLYLV RVINAVVNET MVFAVASHSF TIVGQNGAYT 240 KRSFTNSLTL APAQVVDVLL CANVNVGHYY ITARPSSGTY ITNGILRYLT TSS* 300 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 4.0e-21 | 34 | 140 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02835 | PLN02835 | 2.0e-22 | 1 | 288 | 304 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 7.0e-24 | 45 | 288 | 273 | + copper ion binding / oxidoreductase | ||
| PLN02991 | PLN02991 | 6.0e-26 | 11 | 288 | 301 | + oxidoreductase | ||
| TIGR03389 | laccase | 6.0e-77 | 25 | 293 | 288 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAR83118.1 | 0 | 1 | 288 | 1 | 307 | secretory laccase [Gossypium arboreum] |
| EMBL | CBI18270.1 | 0 | 15 | 293 | 1 | 299 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263602.1 | 0 | 21 | 293 | 26 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002325575.1 | 0 | 20 | 273 | 8 | 274 | multicopper oxidase [Populus trichocarpa] |
| RefSeq | XP_002527127.1 | 0 | 7 | 275 | 14 | 291 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3v9e_A | 0.000000000000001 | 21 | 292 | 61 | 353 | A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada |
| PDB | 3sqr_A | 0.000000000000002 | 21 | 292 | 61 | 353 | A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution |
| PDB | 2qt6_B | 0.000000000000004 | 46 | 288 | 22 | 281 | A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus |
| PDB | 2qt6_A | 0.000000000000004 | 46 | 288 | 22 | 281 | A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus |
| PDB | 3v9c_A | 0.00000000000001 | 45 | 288 | 21 | 281 | A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus |
| Transmembrane Domains | |||||
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| Start | End | ||||
| 7 | 29 | ||||
| Signal Peptide | |||||
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| Cleavage Site | |||||
| 25 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| GR930200 | 290 | 1 | 290 | 0 |
| CO083229 | 263 | 1 | 263 | 0 |
| CD486428 | 236 | 1 | 236 | 0 |
| DW517319 | 242 | 32 | 273 | 0 |
| ES833692 | 249 | 23 | 271 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Gossypium raimondii | Gorai.009G260700.1 | Gorai.009G261600.1 | Gorai.009G261400.1 | Gorai.009G287100.1 | Gorai.009G261200.2 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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