Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G270800.1 |
Family | AA5 |
Protein Properties | Length: 548 Molecular Weight: 59901.2 Isoelectric Point: 10.0592 |
Chromosome | Chromosome/Scaffold: 09 Start: 22641819 End: 22643462 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 29 | 546 | 0 |
AADGRWQLLQKSIGVSAMHMQLLRNDRVVVFDRTDFGPSKLPLPNGKCRNDPSDTALKVDCTAHSVEYDVLTNTFRPLMVQTDVWCSSGAIMPNGNLVQT GGFNDGERRVRTFSPCSTCDWQETPNGLAAKRWYASNHILPDGRQIVVGGRRQFNYEFVPKTITANTFSLPFLSQTSERGVENNLYPFVFLNVDGNLFIF ANNRAILLDYMKNKVVKTYPTIPGGDPRSYPSTGSAILLPLKNLKAAAIQAEVLVCGGAPKGSYVQAVRGKFIGALNTCARIKITDPNPQWVMETMPLAR VMGDMILLPNGNVLLINGAGSGTAGWELGRNPVLNPVLYKPDNKIGTRFETQNPTTVPRLYHSTAALLRDGRVLVGGSNPHAFYNLTGVLFPTELSLEAF SPAYLDTKFNNIRPTITAPKSMSGIKYGTKLTVRVVITGKVAKNQVSVTMVAPAFNTHSFSMNQRLLVLGNDKVVALGKATYDIDVTTPRSGNLAPSGFY LLFVVHQGIPSKGIWVKL |
Full Sequence |
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Protein Sequence Length: 548 Download |
MSAIPFVFSV LILQLLFASQ QCHRFLAAAA DGRWQLLQKS IGVSAMHMQL LRNDRVVVFD 60 RTDFGPSKLP LPNGKCRNDP SDTALKVDCT AHSVEYDVLT NTFRPLMVQT DVWCSSGAIM 120 PNGNLVQTGG FNDGERRVRT FSPCSTCDWQ ETPNGLAAKR WYASNHILPD GRQIVVGGRR 180 QFNYEFVPKT ITANTFSLPF LSQTSERGVE NNLYPFVFLN VDGNLFIFAN NRAILLDYMK 240 NKVVKTYPTI PGGDPRSYPS TGSAILLPLK NLKAAAIQAE VLVCGGAPKG SYVQAVRGKF 300 IGALNTCARI KITDPNPQWV METMPLARVM GDMILLPNGN VLLINGAGSG TAGWELGRNP 360 VLNPVLYKPD NKIGTRFETQ NPTTVPRLYH STAALLRDGR VLVGGSNPHA FYNLTGVLFP 420 TELSLEAFSP AYLDTKFNNI RPTITAPKSM SGIKYGTKLT VRVVITGKVA KNQVSVTMVA 480 PAFNTHSFSM NQRLLVLGND KVVALGKATY DIDVTTPRSG NLAPSGFYLL FVVHQGIPSK 540 GIWVKLQ* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam09118 | DUF1929 | 1.0e-23 | 441 | 546 | 108 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. |
cd02851 | E_set_GO_C | 2.0e-27 | 437 | 546 | 112 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. |
pfam07250 | Glyoxal_oxid_N | 1.0e-137 | 46 | 286 | 245 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_173419.1 | 0 | 26 | 547 | 25 | 548 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | NP_177692.1 | 0 | 16 | 547 | 21 | 547 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002280559.1 | 0 | 6 | 547 | 12 | 553 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301997.1 | 0 | 28 | 546 | 1 | 523 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510488.1 | 0 | 20 | 547 | 20 | 547 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eic_A | 3e-18 | 107 | 539 | 221 | 630 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2eib_A | 3e-18 | 107 | 539 | 221 | 630 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 1t2x_A | 4e-18 | 107 | 539 | 221 | 630 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 2wq8_A | 5e-18 | 107 | 539 | 243 | 652 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2vz3_A | 5e-18 | 107 | 539 | 221 | 630 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |