| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G287100.1 |
| Family | AA1 |
| Protein Properties | Length: 296 Molecular Weight: 32573.3 Isoelectric Point: 4.275 |
| Chromosome | Chromosome/Scaffold: 09 Start: 24434848 End: 24436605 |
| Description | laccase 14 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 29 | 244 | 1.3999e-42 |
| HYYEFILQETEITKLYSTKTILTVNGSFPGPEIRVRRGDTVYVNVLNQGRSAVSFDWQGFEDPVDGSNELIQPGKNFTYEIELDDEIGTLWWHARSAWAK ATVHGAFVILPAADEEYPFPTPTSDQIIIFGEWFKQELTEANETIAAGQADGYTINGHLGETYGCSNDTTYLLEVAYEGLYLLRLINAVANETMVFAIAQ HSFTTVGQNATYSQRS | |||
| Full Sequence |
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| Protein Sequence Length: 296 Download |
| MGSQKHVVLL LSVLLILNSL LFSGADEDHY YEFILQETEI TKLYSTKTIL TVNGSFPGPE 60 IRVRRGDTVY VNVLNQGRSA VSFDWQGFED PVDGSNELIQ PGKNFTYEIE LDDEIGTLWW 120 HARSAWAKAT VHGAFVILPA ADEEYPFPTP TSDQIIIFGE WFKQELTEAN ETIAAGQADG 180 YTINGHLGET YGCSNDTTYL LEVAYEGLYL LRLINAVANE TMVFAIAQHS FTTVGQNATY 240 SQRSFSTSLT LAPGQTLDVL LSANQNVGQY YITAQPSSGR HNTTGVIQYL TSTGV* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02792 | PLN02792 | 9.0e-26 | 25 | 272 | 261 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 2.0e-26 | 25 | 294 | 287 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 4.0e-27 | 24 | 292 | 283 | + oxidoreductase | ||
| pfam07732 | Cu-oxidase_3 | 6.0e-29 | 35 | 142 | 118 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 3.0e-84 | 29 | 289 | 280 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAR83118.1 | 0 | 1 | 294 | 1 | 312 | secretory laccase [Gossypium arboreum] |
| GenBank | ACI46953.1 | 0 | 1 | 294 | 1 | 311 | putative lacasse/diphenol oxidase [Castanea mollissima] |
| EMBL | CBI18270.1 | 0 | 15 | 289 | 1 | 294 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263602.1 | 0 | 29 | 289 | 33 | 311 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002527127.1 | 0 | 1 | 289 | 1 | 310 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gyc_A | 0.000000000000002 | 47 | 279 | 22 | 266 | A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions |
| PDB | 1asq_B | 0.000000000000002 | 49 | 284 | 24 | 289 | A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions |
| PDB | 1asq_A | 0.000000000000002 | 49 | 284 | 24 | 289 | A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions |
| PDB | 1asp_B | 0.000000000000002 | 49 | 284 | 24 | 289 | A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions |
| PDB | 1asp_A | 0.000000000000002 | 49 | 284 | 24 | 289 | A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
| Start | End | ||||
| 7 | 25 | ||||
| Signal Peptide | |||||
|---|---|---|---|---|---|
| Cleavage Site | |||||
| 25 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GR924367 | 280 | 1 | 280 | 0 |
| GR930122 | 265 | 1 | 265 | 0 |
| GR924267 | 195 | 102 | 296 | 0 |
| GR929427 | 195 | 102 | 296 | 0 |
| GR930122 | 31 | 264 | 292 | 0.69 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Gossypium raimondii | Gorai.009G260700.1 | Gorai.009G261200.1 | Gorai.009G261600.1 | Gorai.009G261400.1 | Gorai.009G261200.2 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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