Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G290800.1 |
Family | GH9 |
Protein Properties | Length: 487 Molecular Weight: 53990.3 Isoelectric Point: 9.0608 |
Chromosome | Chromosome/Scaffold: 09 Start: 25049334 End: 25051892 |
Description | cellulase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 29 | 482 | 0 |
NYRDALQKSFLFFQGQRSGKLPANQKVSWRSNSGLSDGSLDHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWGTLEYGKRMGPQLQEARAAIRWATDYLLK CANSKPGKLYVGVGDPNVDHKCWERPEDMDTVRTVYSVSSSNPGSDVAGETAAALAAASLVFRRVDPKYSRLLLQTARKVMAFAIQYRGAYSDSLGSAVC PFYCSYSGYKDELLWGAAWLFRATNDAYYYNFLKTLGADDQPDIFSWDNKYAGAHVLLSRMALLGKDKNFEQFKQEAESFMCRILPNSPYSTTQYTQGGL MYKLPESNLQYVTSISFLLTTYGKYMKAKKQTFNCGSLFVTPNSLIGLAKRQVDYILGENPIKMSYMVGFGRNFPKRIHHRGSSLPSLAKHRQSIGCDGG FQPYFYSSNPNPNVLVGAIVGGPNQNDGFPDDRSDYSHSEPSTYITAALVGPLA |
Full Sequence |
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Protein Sequence Length: 487 Download |
MAKANILLIF LCSLVLLLLG GVRVEGNPNY RDALQKSFLF FQGQRSGKLP ANQKVSWRSN 60 SGLSDGSLDH VDLTGGYYDA GDNVKFNFPM AFTTTMLSWG TLEYGKRMGP QLQEARAAIR 120 WATDYLLKCA NSKPGKLYVG VGDPNVDHKC WERPEDMDTV RTVYSVSSSN PGSDVAGETA 180 AALAAASLVF RRVDPKYSRL LLQTARKVMA FAIQYRGAYS DSLGSAVCPF YCSYSGYKDE 240 LLWGAAWLFR ATNDAYYYNF LKTLGADDQP DIFSWDNKYA GAHVLLSRMA LLGKDKNFEQ 300 FKQEAESFMC RILPNSPYST TQYTQGGLMY KLPESNLQYV TSISFLLTTY GKYMKAKKQT 360 FNCGSLFVTP NSLIGLAKRQ VDYILGENPI KMSYMVGFGR NFPKRIHHRG SSLPSLAKHR 420 QSIGCDGGFQ PYFYSSNPNP NVLVGAIVGG PNQNDGFPDD RSDYSHSEPS TYITAALVGP 480 LAYFSH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02175 | PLN02175 | 0 | 25 | 485 | 461 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 29 | 486 | 462 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 24 | 485 | 466 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 29 | 482 | 464 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 0 | 27 | 485 | 466 | + cellulase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAA96135.1 | 0 | 8 | 485 | 6 | 483 | endo-1,4-beta-glucanase [Pisum sativum] |
GenBank | AAB65156.1 | 0 | 24 | 485 | 22 | 483 | basic cellulase [Citrus sinensis] |
GenBank | AAQ55294.1 | 0 | 1 | 485 | 1 | 492 | endo-1,4-beta-glucanase [Malus x domestica] |
GenBank | AAT75042.1 | 0 | 24 | 485 | 21 | 482 | Cel9B [Populus tremula x Populus tremuloides] |
RefSeq | XP_002329161.1 | 0 | 24 | 485 | 21 | 477 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 29 | 482 | 4 | 426 | PP Chain p, Localization Of The Large Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome |
PDB | 1ksc_A | 0 | 29 | 482 | 4 | 426 | PP Chain p, Localization Of The Large Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome |
PDB | 1ks8_A | 0 | 29 | 482 | 4 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 29 | 482 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 29 | 482 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |