| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G323100.1 |
| Family | AA1 |
| Protein Properties | Length: 365 Molecular Weight: 40520.2 Isoelectric Point: 9.613 |
| Chromosome | Chromosome/Scaffold: 09 Start: 31776992 End: 31778767 |
| Description | laccase 12 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 2 | 364 | 0 |
| EIRRHQFVIQATPVKRLCNTHNRITVNGMFPGPTLEVRNGDSFEFKVVNKARYSVTIHWHGVRQMRIGWADGPEFVTQCPIRPGGSYTYRFTIQGQEGTL WWHAHSSWLKATIYGALIIRPRLGESYHFPKPNLETPIVLGEWWDANPIDVVREATRTGAAPNVSDAYTINAQPGDLYKCSSKDATIIPIDASETNLLRV INAALNQPLFFAVANHTLTVVGADATYIKPFTTSVLMLGAGQTTDVLIKADQRPTRYYMAARAYQSVQNVPFDNPTTIAILKYKSSKKGNAPKLIMPSLP AYNDTNTIDESLFFTVDLGLNNYPPNFRKSRCQGPNGTHLAASMNNASFMLPPSISLLQAHQQ | |||
| Full Sequence |
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| Protein Sequence Length: 365 Download |
| GEIRRHQFVI QATPVKRLCN THNRITVNGM FPGPTLEVRN GDSFEFKVVN KARYSVTIHW 60 HGVRQMRIGW ADGPEFVTQC PIRPGGSYTY RFTIQGQEGT LWWHAHSSWL KATIYGALII 120 RPRLGESYHF PKPNLETPIV LGEWWDANPI DVVREATRTG AAPNVSDAYT INAQPGDLYK 180 CSSKDATIIP IDASETNLLR VINAALNQPL FFAVANHTLT VVGADATYIK PFTTSVLMLG 240 AGQTTDVLIK ADQRPTRYYM AARAYQSVQN VPFDNPTTIA ILKYKSSKKG NAPKLIMPSL 300 PAYNDTNTID ESLFFTVDLG LNNYPPNFRK SRCQGPNGTH LAASMNNASF MLPPSISLLQ 360 AHQQ* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00394 | Cu-oxidase | 1.0e-37 | 136 | 287 | 156 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
| PLN02604 | PLN02604 | 5.0e-41 | 1 | 353 | 384 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-47 | 3 | 355 | 390 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07732 | Cu-oxidase_3 | 5.0e-52 | 9 | 123 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 0 | 1 | 362 | 385 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK92474.1 | 0 | 1 | 364 | 6 | 390 | unknown [Populus trichocarpa] |
| EMBL | CAN75316.1 | 0 | 1 | 364 | 31 | 417 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI25418.1 | 0 | 1 | 364 | 31 | 417 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273875.1 | 0 | 1 | 364 | 31 | 417 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315131.1 | 0 | 1 | 364 | 31 | 415 | laccase 90c [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 4e-38 | 2 | 355 | 2 | 374 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1asq_A | 4e-38 | 2 | 355 | 2 | 374 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1asp_B | 4e-38 | 2 | 355 | 2 | 374 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1asp_A | 4e-38 | 2 | 355 | 2 | 374 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 1aso_B | 4e-38 | 2 | 355 | 2 | 374 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX658195 | 273 | 6 | 278 | 0 |
| DY972293 | 269 | 6 | 274 | 0 |
| DY263574 | 352 | 1 | 326 | 0 |
| FY912763 | 244 | 6 | 249 | 0 |
| FC917752 | 241 | 4 | 244 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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