Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G362600.2 |
Family | GT20 |
Protein Properties | Length: 908 Molecular Weight: 102200 Isoelectric Point: 6.6872 |
Chromosome | Chromosome/Scaffold: 09 Start: 47933090 End: 47938974 |
Description | trehalose-6-phosphate synthase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 53 | 519 | 0 |
QRLLVVANRLPVSAVRRGEDSWSLDISAGGLVSALLGVKQFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYL GLPQEDRLATTRSFQSQFAAYKKANQMFADVVNAHYEEGDVVWCHDYHLMYLPECLKKYNTKMKVGWFLHTPFPSSEIHRTLPSRYELLRSVLAADLVGF HTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALELPQVQEHIKELKERFSGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENP YWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDCSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEAKKGVLVLS EFAGAAQSLGAGAVLVNPWNITEVAASIGQALNMPAEEREKRHCHNFHHVTEHTAQEWAETFVSELN |
Full Sequence |
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Protein Sequence Length: 908 Download |
MPGNKYNGNS NHIPTRVERL LRERVLSEQR KSIRASQSNE YLEEAGAARP FGQRLLVVAN 60 RLPVSAVRRG EDSWSLDISA GGLVSALLGV KQFEARWIGW AGVNVPDEIG QKALTKALAE 120 KRCIPVFLDE EIVHQYYNGY CNNILWPLFH YLGLPQEDRL ATTRSFQSQF AAYKKANQMF 180 ADVVNAHYEE GDVVWCHDYH LMYLPECLKK YNTKMKVGWF LHTPFPSSEI HRTLPSRYEL 240 LRSVLAADLV GFHTYDYARH FVSACTRILG LEGTPEGVED QGKLTRVAAF PIGIDSDRFI 300 RALELPQVQE HIKELKERFS GRKVMLGVDR LDMIKGIPQK LLAFEKFLEE NPYWRDKVVL 360 LQIAVPTRTD VPEYQKLTSQ VHEIVGRING RFGTLTAVPI HHLDCSLDFH ALCALYAVTD 420 VALVTSLRDG MNLVSYEFVA CQEAKKGVLV LSEFAGAAQS LGAGAVLVNP WNITEVAASI 480 GQALNMPAEE REKRHCHNFH HVTEHTAQEW AETFVSELND TVVEAQLRSS KVPPELPQND 540 AMECYLLSSN RLVILGFNTT LTEPVDTPGS RGDQIKEMEL KLHPALREPL TALCNDPKTT 600 IVVLSGSDRC VLDKNFGEYN LWLAAENGMF LRHTKGDWMT TMPEHLNLEW IDSVKHVFEY 660 FTERTPRSHF DFRDTSLVWN YKYADIEFGR LQARDMLQHL WTGPISNASV DVVQGSRSVE 720 GAAIDRILGE IVHTTSMTTP IDYVLCIGHF LGKDEDVYTF FEPELPFDAL SIARSKPFDG 780 PRLLPAERSP PLKLPASKSG AKSSLHKMTQ PPFPAPDRRT SSYYSGESLR RHPSVPEKIS 840 WSVLDLKGDN YFSCAVGRTR TSARYLLGSS DDVVSFLNRL TNASSSSDLV FGTDSLHLHP 900 THIRTSV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03064 | PLN03064 | 0 | 1 | 887 | 938 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03063 | PLN03063 | 0 | 43 | 891 | 857 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
TIGR02400 | trehalose_OtsA | 0 | 54 | 520 | 469 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. | ||
pfam00982 | Glyco_transf_20 | 0 | 53 | 520 | 474 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PRK14501 | PRK14501 | 0 | 54 | 773 | 735 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA69879.1 | 0 | 1 | 886 | 1 | 941 | trehalose-6-phosphate synthase [Arabidopsis thaliana] |
RefSeq | NP_177979.1 | 0 | 1 | 886 | 1 | 941 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002285632.1 | 0 | 1 | 886 | 1 | 926 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331300.1 | 0 | 1 | 885 | 1 | 922 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531237.1 | 0 | 1 | 887 | 1 | 926 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gz5_D | 0 | 54 | 522 | 2 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_C | 0 | 54 | 522 | 2 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_B | 0 | 54 | 522 | 2 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_A | 0 | 54 | 522 | 2 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 2wtx_D | 0 | 54 | 528 | 3 | 464 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES813375 | 395 | 415 | 800 | 0 |
CV711307 | 292 | 53 | 344 | 0 |
CX546763 | 309 | 35 | 343 | 0 |
DW069910 | 288 | 140 | 427 | 0 |
CX545499 | 305 | 357 | 661 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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