Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G374500.1 |
Family | GT47 |
Protein Properties | Length: 508 Molecular Weight: 59065 Isoelectric Point: 9.3384 |
Chromosome | Chromosome/Scaffold: 09 Start: 50922160 End: 50923724 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 153 | 449 | 0 |
TGLSGVIPEDLVPAWYWTDQFAMEIIYHNRILNYKCRTMEPDLATAFYIPFYAGLAVGKYLWFKYRWKDRDRYCEMILKWLQEQPHWNSSGGWDHFITMG RITWDFRRTKDEDWGSKCIYLPGMRNITRLLIERNPWDYFDVAVPYPTGFHPRSDSDVLEWQDFVRNHNRKTLFCFAGAPRDAIKNDFRSLLLRQCMNVS GLCRAVDCAGTRCSNGTSLVLEAFLDSEFCLQPRGDSFTRRSIFDCMVAGSIPVFFWHRTAYLQYQWFLPSDPKSYSVFIHRNEVKNGTSIKSVLES |
Full Sequence |
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Protein Sequence Length: 508 Download |
MLPTSTTTTT TTTPKPPSPC FPNSTTASPK SPKLPYLSAI DRKPSSSSLQ FQPYFFLPNH 60 VRLWLLLFII SLQIIILLMA RTLHLSHRRS HFPSHPHHHL LQNPLTFHPR RPLPLFHHPT 120 TAPSELLDNC VELDPWHSRC RALSNDGFGS KATGLSGVIP EDLVPAWYWT DQFAMEIIYH 180 NRILNYKCRT MEPDLATAFY IPFYAGLAVG KYLWFKYRWK DRDRYCEMIL KWLQEQPHWN 240 SSGGWDHFIT MGRITWDFRR TKDEDWGSKC IYLPGMRNIT RLLIERNPWD YFDVAVPYPT 300 GFHPRSDSDV LEWQDFVRNH NRKTLFCFAG APRDAIKNDF RSLLLRQCMN VSGLCRAVDC 360 AGTRCSNGTS LVLEAFLDSE FCLQPRGDSF TRRSIFDCMV AGSIPVFFWH RTAYLQYQWF 420 LPSDPKSYSV FIHRNEVKNG TSIKSVLESY SKEEVKKIRE KVIEYIPKLV YAKPKEGLES 480 IKDAFDVAIE GALKRIKEQK QFGHKWK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-54 | 162 | 450 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201028.1 | 0 | 115 | 507 | 125 | 517 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270309.1 | 0 | 19 | 506 | 3 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318866.1 | 0 | 22 | 506 | 11 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321855.1 | 0 | 59 | 506 | 46 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 19 | 506 | 7 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |