| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G409200.4 |
| Family | GT30 |
| Protein Properties | Length: 325 Molecular Weight: 36739 Isoelectric Point: 9.7686 |
| Chromosome | Chromosome/Scaffold: 09 Start: 61446735 End: 61450092 |
| Description | KDO transferase A |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT30 | 43 | 224 | 0 |
| RWRERLGRPSLRRPSSGPLLWFHAVSLGEGMAAIPVIKFCSQRRPDVHILMTTTTLSAFEVLKDRLPANVIYQFAPIDTPAAMDAFLGYWKPNWIVIMES ELWPNLIIGASKCGIGLALLNARLSAKSFRHWSRPVLFPLISLLLSKFSLIAPLSSVQAIHFQLLQAPPFSIKFSGDLKYAV | |||
| Full Sequence |
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| Protein Sequence Length: 325 Download |
| MTGPMAKGEI VYKIYRALTY GLSPLLHLHL HWRKLRGLEH PIRWRERLGR PSLRRPSSGP 60 LLWFHAVSLG EGMAAIPVIK FCSQRRPDVH ILMTTTTLSA FEVLKDRLPA NVIYQFAPID 120 TPAAMDAFLG YWKPNWIVIM ESELWPNLII GASKCGIGLA LLNARLSAKS FRHWSRPVLF 180 PLISLLLSKF SLIAPLSSVQ AIHFQLLQAP PFSIKFSGDL KYAVDEYEQK DTRHIEYLQK 240 QLSQKQVWMA ASIHRGEEEI IMGVHNVLVQ THPDIVTIIV PRHPQHGQEI AEELQKGGQN 300 VALRSQHEEL IPGISIYLVD TLGI* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04413 | Glycos_transf_N | 5.0e-47 | 63 | 224 | 162 | + 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. | ||
| COG1519 | KdtA | 5.0e-72 | 15 | 324 | 311 | + 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK05749 | PRK05749 | 2.0e-80 | 14 | 323 | 310 | + 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016740 | transferase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABE80128.2 | 0 | 5 | 323 | 1 | 320 | Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal [Medicago truncatula] |
| EMBL | CBI30224.1 | 0 | 7 | 323 | 5 | 322 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277784.1 | 0 | 7 | 323 | 5 | 322 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322900.1 | 0 | 7 | 323 | 7 | 323 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528642.1 | 0 | 2 | 323 | 4 | 325 | 3-deoxy-d-manno-octulosonic-acid transferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xcu_D | 0.0000000000003 | 62 | 324 | 43 | 270 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| PDB | 2xcu_C | 0.0000000000003 | 62 | 324 | 43 | 270 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| PDB | 2xcu_B | 0.0000000000003 | 62 | 324 | 43 | 270 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| PDB | 2xcu_A | 0.0000000000003 | 62 | 324 | 43 | 270 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| PDB | 2xci_D | 0.0000000000003 | 62 | 324 | 43 | 270 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT556002 | 309 | 17 | 317 | 0 |
| DY266328 | 313 | 10 | 320 | 0 |
| FC901247 | 305 | 10 | 312 | 0 |
| DY269671 | 310 | 10 | 317 | 0 |
| DY288817 | 316 | 10 | 323 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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